RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 A0A1W2PQD8 194 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 NEMFO60524 1076 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 CMA1P23946 247 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 CDC25AP30304 524 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 CLK2P49760 499 aaKnown RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 ATP2C1P98194 919 aaPredicted RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 PPIL2Q13356 520 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 LDLRAD1Q5T700 205 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 SNRNP48Q6IEG0 339 aaKnown RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 NSMFQ6X4W1 530 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 USP49Q70CQ1 688 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 EPSTI1Q96J88 318 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 ZFP91Q96JP5 570 aaPredicted RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 TRERF1Q96PN7 1200 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 P2RX7Q99572 595 aaKnown RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 SDF4Q9BRK5 362 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 TNMDQ9H2S6 317 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 GPBP1L1Q9HC44 474 aaPredicted RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 ABCB11O95342 1321 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 A0A0G2JLL6 359 aaPredicted RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 SPDYE16A6NNV3 312 aaPredicted RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 CXCL11O14625 94 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 SLC37A4O43826 429 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 GJA5P36382 358 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 ZNF76P36508 570 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 TXKP42681 527 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 SYKP43405 635 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 SNAPC2Q13487 334 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 SNW1Q13573 536 aaKnown RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 TMEM132BQ14DG7 1078 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 CALCRLQ16602 461 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 MUM1L1Q5H9M0 696 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 SH3D19Q5HYK7 790 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 CHADLQ6NUI6 762 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 DTHD1Q6ZMT9 781 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 PRRT2Q7Z6L0 340 aaPredicted RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 RASSF8Q8NHQ8 419 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 ERCC4Q92889 916 aaPredicted RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 GJA10Q969M2 543 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 PAGR1Q9BTK6 254 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 DDX19AQ9NUU7 478 aaKnown RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 FAM13BQ9NYF5 915 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 DDX25Q9UHL0 483 aaKnown RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 KCNH3Q9ULD8 1083 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 RIPK3Q9Y572 518 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 ZNF202O95125 648 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 FOSP01100 380 aaPredicted RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 HUNKP57058 714 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 ARHGAP4P98171 946 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 AP3B2Q13367 1082 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 IL17AQ16552 155 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 PRR16Q569H4 304 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 CST9Q5W186 159 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 RESP18Q5W5W9 173 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 SYMPKQ92797 1274 aaKnown RBP4.21□□□□□ -1.74
RTN4-208ENST00000404909 FERMT2Q96AC1 680 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 RNF146Q9NTX7 359 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 MYH15Q9Y2K3 1946 aa4.21□□□□□ -1.74
RTN4-208ENST00000404909 POLR2DO15514 142 aaKnown RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 ITGBL1O95965 494 aaPredicted RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 OR52Z1P0C646 297 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 FDX1P10109 184 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 STAT3P40763 770 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 TECP42680 631 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 FASTKD5Q7L8L6 764 aaKnown RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 MCF2L2Q86YR7 1114 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 FMR1NBQ8N0W7 255 aaPredicted RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 C4orf32Q8N8J7 132 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 PROCA1Q8NCQ7 364 aaPredicted RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 ENGASEQ8NFI3 743 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 TEX13BQ9BXU2 312 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 ASCC2Q9H1I8 757 aaPredicted RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 CLSTN2Q9H4D0 955 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 KCNH4Q9UQ05 1017 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 PP2D1A8MPX8 630 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 PIK3CDO00329 1044 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 EDIL3O43854 480 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 RPS6P62753 249 aaKnown RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 FKBP1BP68106 108 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 GRM1Q13255 1194 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 WDR78Q5VTH9 848 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 ARL6IP4Q66PJ3 421 aaKnown RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 RNF207Q6ZRF8 634 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 GAS2L3Q86XJ1 694 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 ZNF579Q8NAF0 562 aaKnown RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 CYP2W1Q8TAV3 490 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 SMCR8Q8TEV9 937 aaPredicted RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 CLEC4DQ8WXI8 215 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 DHX58Q96C10 678 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 PURBQ96QR8 312 aaKnown RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 PLIN2Q99541 437 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 ZNF214Q9UL59 606 aaPredicted RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 AGTPBP1Q9UPW5 1226 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 CCL15-CCL14A0A0B4J2E2 113 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 GOLGA6L3A6NEY3 463 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 FAM86B1E9PN63 330 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 FAM86B2P0C5J1 330 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 CYP2C8P10632 490 aa4.2□□□□□ -1.74
RTN4-208ENST00000404909 EIF2AK2P19525 551 aaKnown RBP4.2□□□□□ -1.74
RTN4-208ENST00000404909 HOXA7P31268 230 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms