RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 FAM149B1Q96BN6 582 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 H0YIN7 160 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 KIF11P52732 1056 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 BASP1P80723 227 aaKnown RBP13.34□□□□□ -0.27
SIN3A-202ENST00000394947 SLC7A5Q01650 507 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 ZBTB17Q13105 803 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 ZC3H12BQ5HYM0 836 aaKnown RBP13.34□□□□□ -0.27
SIN3A-202ENST00000394947 SMYD4Q8IYR2 804 aaPredicted RBP13.34□□□□□ -0.27
SIN3A-202ENST00000394947 BCS1LQ9Y276 419 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 MYRIPQ8NFW9 859 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 HSPH1Q92598 858 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 SMYD3Q9H7B4 428 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 SLC38A10Q9HBR0 1119 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 ATP8A1Q9Y2Q0 1164 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 PPIP5K1Q6PFW1 1433 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 CPP00450 1065 aa13.34□□□□□ -0.27
SIN3A-202ENST00000394947 DDX25Q9UHL0 483 aaKnown RBP13.34□□□□□ -0.27
SIN3A-202ENST00000394947 NCKAP5LQ9HCH0 1330 aa13.33□□□□□ -0.27
SIN3A-202ENST00000394947 CLIC2O15247 247 aa13.33□□□□□ -0.27
SIN3A-202ENST00000394947 ALDH1L1O75891 902 aa13.33□□□□□ -0.27
SIN3A-202ENST00000394947 ESRRBO95718 433 aa13.33□□□□□ -0.27
SIN3A-202ENST00000394947 A1BGP04217 495 aa13.33□□□□□ -0.27
SIN3A-202ENST00000394947 SMAD5Q99717 465 aaKnown RBP13.33□□□□□ -0.27
SIN3A-202ENST00000394947 HESX1Q9UBX0 185 aa13.33□□□□□ -0.27
SIN3A-202ENST00000394947 VCPP55072 806 aaKnown RBP13.33□□□□□ -0.28
SIN3A-202ENST00000394947 RNASELQ05823 741 aaKnown RBP13.33□□□□□ -0.28
SIN3A-202ENST00000394947 DYDC2Q96IM9 177 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 EPS15L1Q9UBC2 864 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 DAAM1Q9Y4D1 1078 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 CCDC195A0A1B0GUA6 201 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 TRIM67Q6ZTA4 783 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.33□□□□□ -0.28
SIN3A-202ENST00000394947 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.33□□□□□ -0.28
SIN3A-202ENST00000394947 PPIP5K2O43314 1243 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 LRRC41Q15345 812 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 MLKLQ8NB16 471 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 SPATA5Q8NB90 893 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 PPHLN1Q8NEY8 458 aaKnown RBP13.33□□□□□ -0.28
SIN3A-202ENST00000394947 HOOK2Q96ED9 719 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 FBXL5Q9UKA1 691 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 TLR3O15455 904 aaKnown RBP13.33□□□□□ -0.28
SIN3A-202ENST00000394947 DMP1Q13316 513 aaPredicted RBP13.33□□□□□ -0.28
SIN3A-202ENST00000394947 IDI1Q13907 227 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 KRT25Q7Z3Z0 450 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 MAIP1Q8WWC4 291 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 SLC13A4Q9UKG4 626 aa13.33□□□□□ -0.28
SIN3A-202ENST00000394947 DKC1O60832 514 aaKnown RBP eCLIP13.32□□□□□ -0.28
SIN3A-202ENST00000394947 THOC5Q13769 683 aaKnown RBP13.32□□□□□ -0.28
SIN3A-202ENST00000394947 GPR162Q16538 588 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 ZBTB8OSQ8IWT0 167 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 REXO1Q8N1G1 1221 aaKnown RBP13.32□□□□□ -0.28
SIN3A-202ENST00000394947 SPC25Q9HBM1 224 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 HOMER3Q9NSC5 361 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 TEKT2Q9UIF3 430 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 MEIS1O00470 390 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 KRT14P02533 472 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 SNAP25P60880 206 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 FLOT2Q14254 428 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 MYOCDQ8IZQ8 938 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 INTS9Q9NV88 658 aaKnown RBP13.32□□□□□ -0.28
SIN3A-202ENST00000394947 ANKRD65E5RJM6 399 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 DNAJC6O75061 913 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 CD58P19256 250 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 MYL7Q01449 175 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 KRT80Q6KB66 452 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 TUBBP07437 444 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 MARK3P27448 753 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 DARS2Q6PI48 645 aaKnown RBP13.32□□□□□ -0.28
SIN3A-202ENST00000394947 ABI1Q8IZP0 508 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 HYOU1Q9Y4L1 999 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 NCAPD3P42695 1498 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 PFDN6O15212 129 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 HEXIM1O94992 359 aaKnown RBP13.32□□□□□ -0.28
SIN3A-202ENST00000394947 PLS3P13797 630 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 ERFP50548 548 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 YWHAEP62258 255 aaKnown RBP13.32□□□□□ -0.28
SIN3A-202ENST00000394947 FAM98CQ17RN3 349 aaKnown RBP13.32□□□□□ -0.28
SIN3A-202ENST00000394947 ZNF507Q8TCN5 953 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 TMEM87BQ96K49 555 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 RPGRIP1Q96KN7 1286 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 IWS1Q96ST2 819 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 E2F4Q16254 413 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 CDKL2Q92772 493 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 PPP1R36Q96LQ0 422 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 ZWILCHQ9H900 591 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 PPP2R2CQ9Y2T4 447 aa13.32□□□□□ -0.28
SIN3A-202ENST00000394947 DDAH1O94760 285 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 DLGAP5Q15398 846 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 PDCD6IPQ8WUM4 868 aaKnown RBP13.31□□□□□ -0.28
SIN3A-202ENST00000394947 JPH2Q9BR39 696 aaPredicted RBP13.31□□□□□ -0.28
SIN3A-202ENST00000394947 PSTPIP2Q9H939 334 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 STRIP2Q9ULQ0 834 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 PLCH2O75038 1416 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 KCTD6Q8NC69 237 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 KCNV2Q8TDN2 545 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 ADPGKQ9BRR6 497 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 PFKFB1P16118 471 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 PPP1R2P41236 205 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 TAF11Q15544 211 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms