RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 CPXCR1Q8N123 301 aa15.33■□□□□ 0.05
SNPH-201ENST00000381867 PPP1R13BQ96KQ4 1090 aa15.33■□□□□ 0.05
SNPH-201ENST00000381867 LARSQ9P2J5 1176 aaKnown RBP15.33■□□□□ 0.05
SNPH-201ENST00000381867 CYP19A1P11511 503 aaPredicted RBP15.33■□□□□ 0.04
SNPH-201ENST00000381867 PHBP35232 272 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 ZSCAN10Q96SZ4 725 aaPredicted RBP15.33■□□□□ 0.04
SNPH-201ENST00000381867 KCNG1Q9UIX4 513 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 CPDO75976 1380 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 LRRD1A4D1F6 860 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 USP17L12C9JPN9 530 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 USP17L21D6R901 530 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 HSPD1P10809 573 aaKnown RBP15.33■□□□□ 0.04
SNPH-201ENST00000381867 TRIM4Q9C037 500 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 CPS1P31327 1500 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 CD163L1Q9NR16 1453 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 PRDM1O75626 825 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 CMA1P23946 247 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 PHKA1P46020 1223 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 TRIM28Q13263 835 aaKnown RBP15.33■□□□□ 0.04
SNPH-201ENST00000381867 USP28Q96RU2 1077 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 COA1Q9GZY4 146 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 CDC23Q9UJX2 597 aa15.33■□□□□ 0.04
SNPH-201ENST00000381867 GCNT3O95395 438 aa15.32■□□□□ 0.04
SNPH-201ENST00000381867 GSPT1P15170 499 aaKnown RBP15.32■□□□□ 0.04
SNPH-201ENST00000381867 PEX19P40855 299 aa15.32■□□□□ 0.04
SNPH-201ENST00000381867 CASC4Q6P4E1 433 aa15.32■□□□□ 0.04
SNPH-201ENST00000381867 MYCT1Q8N699 235 aa15.32■□□□□ 0.04
SNPH-201ENST00000381867 PPP4R1Q8TF05 950 aa15.32■□□□□ 0.04
SNPH-201ENST00000381867 PRAMEF22A3QJZ6 481 aa15.32■□□□□ 0.04
SNPH-201ENST00000381867 STAT1P42224 750 aa15.32■□□□□ 0.04
SNPH-201ENST00000381867 PTPN12Q05209 780 aaKnown RBP15.32■□□□□ 0.04
SNPH-201ENST00000381867 SPATA31A1Q5TZJ5 1347 aa15.32■□□□□ 0.04
SNPH-201ENST00000381867 RGS12O14924 1447 aa15.32■□□□□ 0.04
SNPH-201ENST00000381867 DTNBO60941 627 aa15.32■□□□□ 0.04
SNPH-201ENST00000381867 TTLL11Q8NHH1 800 aa15.32■□□□□ 0.04
SNPH-201ENST00000381867 MRPL44Q9H9J2 332 aaKnown RBP15.32■□□□□ 0.04
SNPH-201ENST00000381867 TPX2Q9ULW0 747 aaKnown RBP15.32■□□□□ 0.04
SNPH-201ENST00000381867 A0A0D9SFI3 127 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 BAG2O95816 211 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 SATB1Q01826 763 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 NSMFQ6X4W1 530 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 ZNF654Q8IZM8 581 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 TDRD7Q8NHU6 1098 aaKnown RBP15.31■□□□□ 0.04
SNPH-201ENST00000381867 KRT12Q99456 494 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 RIC8AQ9NPQ8 531 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 SUSD4Q5VX71 490 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 PALM2Q8IXS6 379 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 SPATS2LQ9NUQ6 558 aaKnown RBP15.31■□□□□ 0.04
SNPH-201ENST00000381867 ABCC12Q96J65 1359 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 STMN1P16949 149 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 SMCR8Q8TEV9 937 aaPredicted RBP15.31■□□□□ 0.04
SNPH-201ENST00000381867 TSPYL2Q9H2G4 693 aaPredicted RBP15.31■□□□□ 0.04
SNPH-201ENST00000381867 DPH5Q9H2P9 285 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 FANCLQ9NW38 375 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 SLC5A4Q9NY91 659 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 RFX7Q2KHR2 1363 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 COG7P83436 770 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 CTAGE3PQ8IX95 158 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 RNF34Q969K3 372 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 PUS3Q9BZE2 481 aaKnown RBP15.31■□□□□ 0.04
SNPH-201ENST00000381867 NT5C3AQ9H0P0 336 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 DHX36Q9H2U1 1008 aaKnown RBP15.31■□□□□ 0.04
SNPH-201ENST00000381867 RICTORQ6R327 1708 aa15.31■□□□□ 0.04
SNPH-201ENST00000381867 ARHGAP44Q17R89 818 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 CFAP61Q8NHU2 1237 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 TRIM6Q9C030 488 aaPredicted RBP15.3■□□□□ 0.04
SNPH-201ENST00000381867 ZSWIM6Q9HCJ5 1215 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 TYW1Q9NV66 732 aaKnown RBP15.3■□□□□ 0.04
SNPH-201ENST00000381867 MYO3BQ8WXR4 1341 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 RASIP1Q5U651 963 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 SPATA1Q5VX52 437 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 DCPSQ96C86 337 aaKnown RBP15.3■□□□□ 0.04
SNPH-201ENST00000381867 VPS54Q9P1Q0 977 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 BUB1O43683 1085 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 SESN3P58005 492 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 PPP2R5DQ14738 602 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 DALRD3Q5D0E6 543 aaKnown RBP15.3■□□□□ 0.04
SNPH-201ENST00000381867 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 NOSTRINQ8IVI9 506 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 CCDC197Q8NCU1 140 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 AZI2Q9H6S1 392 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 PFKFB2O60825 505 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 RBBP5Q15291 538 aaKnown RBP15.3■□□□□ 0.04
SNPH-201ENST00000381867 MIER3Q7Z3K6 550 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 ZMYM6O95789 1325 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 PHLPP2Q6ZVD8 1323 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 SUN1O94901 812 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 ADCY8P40145 1251 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 RAD51AP2Q09MP3 1159 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
SNPH-201ENST00000381867 TTLL6Q8N841 843 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 ISCA1Q9BUE6 129 aa15.3■□□□□ 0.04
SNPH-201ENST00000381867 EPN1Q9Y6I3 576 aaPredicted RBP15.3■□□□□ 0.04
SNPH-201ENST00000381867 SEC31AO94979 1220 aaKnown RBP15.29■□□□□ 0.04
SNPH-201ENST00000381867 XRCC5P13010 732 aaKnown RBP15.29■□□□□ 0.04
SNPH-201ENST00000381867 MAN1A1P33908 653 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 CERKLQ49MI3 558 aaPredicted RBP15.29■□□□□ 0.04
SNPH-201ENST00000381867 FAF1Q9UNN5 650 aaPredicted RBP15.29■□□□□ 0.04
SNPH-201ENST00000381867 A0A087WUV0 522 aaPredicted RBP15.29■□□□□ 0.04
SNPH-201ENST00000381867 DDX39AO00148 427 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms