RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 MCTP2Q6DN12 878 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 PTF1AQ7RTS3 328 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 LRRC15Q8TF66 581 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 FAM169AQ9Y6X4 670 aa18.51■□□□□ 0.55
PCDHA1-201ENST00000378133 ZNF507Q8TCN5 953 aa18.5■□□□□ 0.55
PCDHA1-201ENST00000378133 ZNF622Q969S3 477 aaKnown RBP eCLIP18.5■□□□□ 0.55
PCDHA1-201ENST00000378133 ANKRD2Q9GZV1 360 aa18.5■□□□□ 0.55
PCDHA1-201ENST00000378133 HERVK_113P62684 666 aa18.5■□□□□ 0.55
PCDHA1-201ENST00000378133 KCNB1Q14721 858 aa18.5■□□□□ 0.55
PCDHA1-201ENST00000378133 GRM4Q14833 912 aa18.5■□□□□ 0.55
PCDHA1-201ENST00000378133 KIAA1328Q86T90 577 aa18.5■□□□□ 0.55
PCDHA1-201ENST00000378133 SLC44A5Q8NCS7 719 aa18.5■□□□□ 0.55
PCDHA1-201ENST00000378133 KBTBD4Q9NVX7 518 aa18.5■□□□□ 0.55
PCDHA1-201ENST00000378133 PDS5AQ29RF7 1337 aaKnown RBP18.5■□□□□ 0.55
PCDHA1-201ENST00000378133 PSMA7O14818 248 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 GOLGA8HP0CJ92 632 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 TSPY3P0CV98 308 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 TSPY8P0CW00 308 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 PPFIA1Q13136 1202 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 WDR59Q6PJI9 974 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 BCAS4Q8TDM0 211 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 SH3RF3Q8TEJ3 882 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 CAPS2Q9BXY5 557 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 SRP68Q9UHB9 627 aaKnown RBP18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 STX8Q9UNK0 236 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 RHOBTB3O94955 611 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 EEF1GP26641 437 aaKnown RBP18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 SWT1Q5T5J6 900 aaKnown RBP18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 NBPF5PQ86XG9 351 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 GIMAP8Q8ND71 665 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 SETDB2Q96T68 719 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 CCSER1Q9C0I3 900 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 CPVLQ9H3G5 476 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 MAGEC2Q9UBF1 373 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 CAPN11Q9UMQ6 739 aa18.49■□□□□ 0.55
PCDHA1-201ENST00000378133 B4DLN1 442 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 ZNF185O15231 689 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 KRT86O43790 486 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 GNAQP50148 359 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 KRT83P78385 493 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 GPATCH11Q8N954 259 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 EHBP1Q8NDI1 1231 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 KAT2BQ92831 832 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 DNAJC7Q99615 494 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 HINFPQ9BQA5 517 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 THAP9Q9H5L6 903 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 RABEP2Q9H5N1 569 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 LAMB1P07942 1786 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 KIAA1551Q9HCM1 1747 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 A0A1W2PQC6 194 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 TTI2Q6NXR4 508 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 SLC51AQ86UW1 340 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 ZNF444Q8N0Y2 327 aaPredicted RBP18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 ANKS1AQ92625 1134 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 CEP89Q96ST8 783 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 EHD4Q9H223 541 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 AGPAT5Q9NUQ2 364 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 BARHL2Q9NY43 387 aa18.48■□□□□ 0.55
PCDHA1-201ENST00000378133 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 SHTN1A0MZ66 631 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 STXBP3O00186 592 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 DIXDC1Q155Q3 683 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 CSGALNACT2Q8N6G5 542 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 BANK1Q8NDB2 785 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 TRPC5Q9UL62 973 aaPredicted RBP18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 PDE2AO00408 941 aaPredicted RBP18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 SPTY2D1Q68D10 685 aaPredicted RBP18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 CCDC70Q6NSX1 233 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 CCDC91Q7Z6B0 441 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 TGFBRAP1Q8WUH2 860 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 DUSP9Q99956 384 aaKnown RBP18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 TUBGCP2Q9BSJ2 902 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 JADE2Q9NQC1 790 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 FAM184BQ9ULE4 1060 aa18.47■□□□□ 0.55
PCDHA1-201ENST00000378133 LDHBP07195 334 aaKnown RBP18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 PLCG1P19174 1290 aa18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 KLK7P49862 253 aa18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 DNM2P50570 870 aa18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 C2orf54Q08AI8 447 aa18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 TMEM47Q9BQJ4 181 aa18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 NYXQ9GZU5 481 aa18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 CCDC88AQ3V6T2 1871 aa18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 GNGT1P63211 74 aa18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 GRIK5Q16478 980 aa18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 TXNRD1Q16881 649 aa18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 IQCEQ6IPM2 695 aa18.46■□□□□ 0.55
PCDHA1-201ENST00000378133 EIF3HO15372 352 aaKnown RBP eCLIP18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 MYL1P05976 194 aa18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 TRIM21P19474 475 aaKnown RBP18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 MNAT1P51948 309 aa18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 TBC1D8BQ0IIM8 1120 aa18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 LETM2Q2VYF4 491 aa18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 GBP6Q6ZN66 633 aa18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 SND1Q7KZF4 910 aaKnown RBP eCLIP18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 CABP7Q86V35 215 aa18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 DAGLBQ8NCG7 672 aa18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 AENQ8WTP8 325 aaKnown RBP18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 TCP11L1Q9NUJ3 509 aa18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 EXOC1Q9NV70 894 aa18.45■□□□□ 0.54
PCDHA1-201ENST00000378133 SAP30BPQ9UHR5 308 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms