RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 A6NJR5 290 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 ZSCAN20P17040 1043 aaPredicted RBP12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 GARSP41250 739 aaKnown RBP12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 LRMPQ12912 555 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 SPATA1Q5VX52 437 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 SCYL2Q6P3W7 929 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 EPSTI1Q96J88 318 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 ACCSQ96QU6 501 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 KDM5AP29375 1690 aaKnown RBP12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 ESYT2A0FGR8 921 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 F8W8V4 182 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 TBC1D8O95759 1140 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 ZNF577Q9BSK1 485 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 HOMER3Q9NSC5 361 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 MTX1Q13505 466 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 UGGT1Q9NYU2 1555 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 KCNQ3O43525 872 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 RPN1P04843 607 aaKnown RBP12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 GRAPQ13588 217 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 CTAGE3PQ8IX95 158 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 PPM1KQ8N3J5 372 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 GRAPLQ8TC17 118 aaPredicted RBP12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 SAMD9Q5K651 1589 aa12.14□□□□□ -0.47
PHACTR4-202ENST00000373839 ABCC12Q96J65 1359 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 CASQ2O14958 399 aaPredicted RBP12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 XPAP23025 273 aaPredicted RBP12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 ARHGAP25P42331 645 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 PIK3CAP42336 1068 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 RPS6KA2Q15349 733 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 NFKBIAP25963 317 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 RNASE9P60153 205 aaKnown RBP12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 PNOCQ13519 176 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 SEPT9Q9UHD8 586 aaPredicted RBP12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 TSC1Q92574 1164 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 LARP4BQ92615 738 aaKnown RBP12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 DHTKD1Q96HY7 919 aaPredicted RBP12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 SPDYE16A6NNV3 312 aaPredicted RBP12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 ABL1P00519 1130 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 IFNB1P01574 187 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 IRX4P78413 519 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 SPDYE2Q495Y8 402 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 TTLL6Q8N841 843 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 FBXO40Q9UH90 709 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 ERBB3P21860 1342 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 PPP6R2O75170 966 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 DLATP10515 647 aaKnown RBP12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 ADD1P35611 737 aaKnown RBP12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 STAT2P52630 851 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 CDC37Q16543 378 aaPredicted RBP12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 EXOC3L4Q17RC7 722 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 CARD6Q9BX69 1037 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 ASAP1Q9ULH1 1129 aa12.13□□□□□ -0.47
PHACTR4-202ENST00000373839 GOLGA8QA0A0J9YX86 632 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 GOLGA8OA6NCC3 632 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 GOLGA8NF8WBI6 632 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 KRT71Q3SY84 523 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 PHLDB2Q86SQ0 1253 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 CEP57Q86XR8 500 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 STAMQ92783 540 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 MRRFQ96E11 262 aaKnown RBP12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 MASTLQ96GX5 879 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 TTC1Q99614 292 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 USP17L3A6NCW0 530 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 USP17L4A6NCW7 530 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 GOLGA8HP0CJ92 632 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 ADRA2BP18089 450 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 PSMC2P35998 433 aaKnown RBP12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 MYL7Q01449 175 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 RSRC2Q7L4I2 434 aaKnown RBP12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 USP17L1Q7RTZ2 530 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 LMNTD2Q8IXW0 634 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 TRMT44Q8IYL2 757 aaKnown RBP12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 AKT3Q9Y243 479 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 RGS12O14924 1447 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 USP6P35125 1406 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 BFSP1Q12934 665 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 MAP4K1Q92918 833 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 FAM8A1Q9UBU6 413 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 RIPOR2Q9Y4F9 1068 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 KDM5CP41229 1560 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 HEG1Q9ULI3 1381 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 WDR46O15213 610 aaKnown RBP12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 MED7O43513 233 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 FMNL1O95466 1100 aaPredicted RBP12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 EEF1GP26641 437 aaKnown RBP12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 ARHGAP4P98171 946 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 USP28Q96RU2 1077 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 SNX25Q9H3E2 840 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 RGS16O15492 202 aaPredicted RBP12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 PDIA3P30101 505 aaKnown RBP12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 PTGDRQ13258 359 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 TSNAXIP1Q2TAA8 658 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 ANKFY1Q9P2R3 1169 aa12.12□□□□□ -0.47
PHACTR4-202ENST00000373839 BTBD18B2RXH4 712 aa12.11□□□□□ -0.47
PHACTR4-202ENST00000373839 ZNF131P52739 623 aa12.11□□□□□ -0.47
PHACTR4-202ENST00000373839 IGBP1P78318 339 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms