RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ZEB2O60315 1214 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 EEF1GP26641 437 aaKnown RBP14.81□□□□□ -0.04
LDB3-202ENST00000361373 AP3B2Q13367 1082 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 UBLCP1Q8WVY7 318 aaPredicted RBP14.81□□□□□ -0.04
LDB3-202ENST00000361373 PARP2Q9UGN5 583 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 SLFN14P0C7P3 912 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 TYW1BQ6NUM6 668 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 TAOK1Q7L7X3 1001 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 ALX1Q15699 326 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 HADHQ16836 314 aaKnown RBP14.81□□□□□ -0.04
LDB3-202ENST00000361373 TMEM206Q9H813 350 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 FBXO40Q9UH90 709 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 CYP4A11Q02928 519 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 PAK2Q13177 524 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 RUFY4Q6ZNE9 571 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 CLIC6Q96NY7 704 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 ASIC3Q9UHC3 531 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 C21orf2O43822 256 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 CRKP46108 304 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 TXNRD1Q16881 649 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 SPOUT1Q5T280 376 aaKnown RBP14.8□□□□□ -0.04
LDB3-202ENST00000361373 FAM193BQ96PV7 902 aaPredicted RBP14.8□□□□□ -0.04
LDB3-202ENST00000361373 TRIM7Q9C029 511 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 MXRA7P84157 204 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 ALCAMQ13740 583 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 CPLX4Q7Z7G2 160 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 FAM76AQ8TAV0 307 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 HAUS4Q9H6D7 363 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 SLC39A2Q9NP94 309 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 MADDQ8WXG6 1647 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 PDE6CP51160 858 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 PDZD4Q76G19 769 aaPredicted RBP14.8□□□□□ -0.04
LDB3-202ENST00000361373 NBPF11Q86T75 865 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 SP8Q8IXZ3 490 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 POMGNT1Q8WZA1 660 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 KCNK9Q9NPC2 374 aa14.8□□□□□ -0.04
LDB3-202ENST00000361373 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.8□□□□□ -0.04
LDB3-202ENST00000361373 V9GYY5 206 aaPredicted RBP14.8□□□□□ -0.04
LDB3-202ENST00000361373 PSDA5PKW4 1024 aaPredicted RBP14.79□□□□□ -0.04
LDB3-202ENST00000361373 PSMD2Q13200 908 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 EPHA10Q5JZY3 1008 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 U2AF1L4Q8WU68 220 aaKnown RBP14.79□□□□□ -0.04
LDB3-202ENST00000361373 ACCSQ96QU6 501 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 PCDHA5Q9Y5H7 936 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 HNRNPDLO14979 420 aaKnown RBP14.79□□□□□ -0.04
LDB3-202ENST00000361373 KIF11P52732 1056 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 RAB17Q9H0T7 212 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 USTQ9Y2C2 406 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 ARHGEF37A1IGU5 675 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 MTMR3Q13615 1198 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 CDC37Q16543 378 aaPredicted RBP14.79□□□□□ -0.04
LDB3-202ENST00000361373 LINC00301Q8NCQ3 95 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 SLC10A4Q96EP9 437 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 PLA2G12BQ9BX93 195 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 SAMD15Q9P1V8 674 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 IKBKBO14920 756 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 TBC1D9BQ66K14 1250 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 H2AFZP0C0S5 128 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 FDX1P10109 184 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 FKBP3Q00688 224 aaKnown RBP14.79□□□□□ -0.04
LDB3-202ENST00000361373 RASA3Q14644 834 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 SETDB1Q15047 1291 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 EXOC3L4Q17RC7 722 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 USP17L2Q6R6M4 530 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 H2AFVQ71UI9 128 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 DAAM2Q86T65 1068 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 DYNLL2Q96FJ2 89 aa14.79□□□□□ -0.04
LDB3-202ENST00000361373 SEPT9Q9UHD8 586 aaPredicted RBP14.79□□□□□ -0.04
LDB3-202ENST00000361373 CEP63Q96MT8 703 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 EBAG9O00559 213 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 PSMC2P35998 433 aaKnown RBP14.78□□□□□ -0.04
LDB3-202ENST00000361373 CFAP157Q5JU67 520 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 CCDC105Q8IYK2 499 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 CERKQ8TCT0 537 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 HAUS1Q96CS2 278 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 ZNF215Q9UL58 517 aaPredicted RBP14.78□□□□□ -0.04
LDB3-202ENST00000361373 ODF2LQ9ULJ1 636 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 SRPRBQ9Y5M8 271 aaKnown RBP14.78□□□□□ -0.04
LDB3-202ENST00000361373 SLC16A2P36021 539 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 ZNF341Q9BYN7 854 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 ST7Q9NRC1 585 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 MFAP3P55082 362 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 LRMPQ12912 555 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 ORC2Q13416 577 aaPredicted RBP14.78□□□□□ -0.04
LDB3-202ENST00000361373 PPP1R18Q6NYC8 613 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 NT5C1BQ96P26 610 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 RPS6KC1Q96S38 1066 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 FANCLQ9NW38 375 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 MYO1AQ9UBC5 1043 aa14.78□□□□□ -0.04
LDB3-202ENST00000361373 STK36Q9NRP7 1315 aa14.77□□□□□ -0.04
LDB3-202ENST00000361373 TLR3O15455 904 aaKnown RBP14.77□□□□□ -0.04
LDB3-202ENST00000361373 PSAPP07602 524 aa14.77□□□□□ -0.04
LDB3-202ENST00000361373 CAPN2P17655 700 aa14.77□□□□□ -0.04
LDB3-202ENST00000361373 PTK2Q05397 1052 aa14.77□□□□□ -0.04
LDB3-202ENST00000361373 WHAMMP3Q1A5X7 153 aa14.77□□□□□ -0.04
LDB3-202ENST00000361373 GIMAP7Q8NHV1 300 aa14.77□□□□□ -0.04
LDB3-202ENST00000361373 ZNF277Q9NRM2 450 aaPredicted RBP14.77□□□□□ -0.04
LDB3-202ENST00000361373 HOXC10Q9NYD6 342 aa14.77□□□□□ -0.04
LDB3-202ENST00000361373 PODXL2Q9NZ53 605 aa14.77□□□□□ -0.04
LDB3-202ENST00000361373 SAR1BQ9Y6B6 198 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms