RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 NCK2O43639 380 aa12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 MOCS3O95396 460 aa12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 MSH2P43246 934 aa12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 CUL4BQ13620 913 aa12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 SPA17Q15506 151 aa12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 ZRSR2Q15696 482 aaKnown RBP12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 CASKIN2Q8WXE0 1202 aa12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 MS4A14Q96JA4 679 aa12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 XPO6Q96QU8 1125 aaKnown RBP12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 LRWD1Q9UFC0 647 aa12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 ABCF2Q9UG63 623 aa12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 PHF24Q9UPV7 400 aa12.56□□□□□ -0.4
SEPSECS-201ENST00000358971 USO1O60763 962 aaKnown RBP12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 PFDN1O60925 122 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 ZPR1O75312 459 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 POLD1P28340 1107 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 HSD17B3P37058 310 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 NCALDP61601 193 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 SETDB1Q15047 1291 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 UBLCP1Q8WVY7 318 aaPredicted RBP12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 ANKRD27Q96NW4 1050 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 MLXIPQ9HAP2 919 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 CWC25Q9NXE8 425 aaPredicted RBP12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 SH3TC1Q8TE82 1336 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 DCDC2CA8MYV0 355 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 FLOT1O75955 427 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 PAEPP09466 180 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 GBP1P32455 592 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 GALNT17Q6IS24 598 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 WDR59Q6PJI9 974 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 DDX46Q7L014 1031 aaKnown RBP12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 KRT12Q99456 494 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 PLCB1Q9NQ66 1216 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 FRMPD1Q5SYB0 1578 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 SPAG1Q07617 926 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 ZNF844Q08AG5 666 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 ITIH4Q14624 930 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 SGSM1Q2NKQ1 1148 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 LZTS2Q9BRK4 669 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 NHEJ1Q9H9Q4 299 aaPredicted RBP12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 ATXN10Q9UBB4 475 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 MAPK8IP1Q9UQF2 711 aa12.55□□□□□ -0.4
SEPSECS-201ENST00000358971 KCNJ18B7U540 433 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 CCNG1P51959 295 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 RAD23BP54727 409 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 RNASE9P60153 205 aaKnown RBP12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 TRIM29Q14134 588 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 KCNJ12Q14500 433 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 KRT71Q3SY84 523 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 CFAP221Q4G0U5 840 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 LRIG3Q6UXM1 1119 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 ZNF572Q7Z3I7 529 aaPredicted RBP12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 IFT74Q96LB3 600 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 LIMA1Q9UHB6 759 aaKnown RBP12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 ADGRB3O60242 1522 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 ZNF609O15014 1411 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 HSPA9P38646 679 aaKnown RBP12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 LCA5Q86VQ0 697 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 SLC17A8Q8NDX2 589 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 ZMYND8Q9ULU4 1186 aaPredicted RBP12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 CD2APQ9Y5K6 639 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 PDLIM1O00151 329 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 RARAP10276 462 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 ATP6V1C1P21283 382 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 KRT26Q7Z3Y9 468 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 APBB1IPQ7Z5R6 666 aaPredicted RBP12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 RNF168Q8IYW5 571 aaPredicted RBP12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 SELENOSQ9BQE4 189 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 SCOCQ9UIL1 159 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 LRRC42Q9Y546 428 aa12.54□□□□□ -0.4
SEPSECS-201ENST00000358971 WDR17Q8IZU2 1322 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 hCG_2014768A0A024R1R8 64 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 PRLRP16471 622 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 PAX3P23760 479 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 TSNAXIP1Q2TAA8 658 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 USP49Q70CQ1 688 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 PCMTD1Q96MG8 357 aaPredicted RBP12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 DNAJC7Q99615 494 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 DMAP1Q9NPF5 467 aaPredicted RBP12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 HGSO14964 777 aaPredicted RBP12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 ANXA1P04083 346 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 MMEP08473 750 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 TCP11X2Q5H9J9 407 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 ERMARDQ5T6L9 678 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 RRAGBQ5VZM2 374 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 ZNF662Q6ZS27 426 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 SEPT14Q6ZU15 432 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 CEP128Q6ZU80 1094 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 PROSER2Q86WR7 435 aaPredicted RBP12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 LRRC34Q8IZ02 419 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 LRRC45Q96CN5 670 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 FAM129AQ9BZQ8 928 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 AFF2P51816 1311 aa12.53□□□□□ -0.4
SEPSECS-201ENST00000358971 PPP1R3GB7ZBB8 358 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms