RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 PYCARDQ9ULZ3 195 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 SCINQ9Y6U3 715 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 BLVRAP53004 296 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 HACE1Q8IYU2 909 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 ARMCX3Q9UH62 379 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-202ENST00000358392 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-202ENST00000358392 PDE6BP35913 854 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 TRAPPC10P48553 1259 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 ADAM9Q13443 819 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 DEPDC1BQ8WUY9 529 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 NT5C3AQ9H0P0 336 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 PCDHA12Q9UN75 941 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 DMP1Q13316 513 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-202ENST00000358392 SZRD1Q7Z422 152 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 CCDC51Q96ER9 411 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 DYDC2Q96IM9 177 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 ALAS1P13196 640 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 MSH2P43246 934 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 PDZD4Q76G19 769 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-202ENST00000358392 SMYD4Q8IYR2 804 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-202ENST00000358392 DNAAF3Q8N9W5 541 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 SMCR8Q8TEV9 937 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-202ENST00000358392 GJA10Q969M2 543 aa12.17□□□□□ -0.46
COL11A1-202ENST00000358392 PRXQ9BXM0 1461 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 hCG_2014768A0A024R1R8 64 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 MOCS3O95396 460 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 FAM178BQ8IXR5 827 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 FBXL13Q8NEE6 735 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 USP28Q96RU2 1077 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 EIF2AQ9BY44 585 aaKnown RBP12.16□□□□□ -0.46
COL11A1-202ENST00000358392 LRRN2O75325 713 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 TMEM191BP0C7N4 346 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 DPP8Q6V1X1 898 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-202ENST00000358392 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-202ENST00000358392 SUCLG2Q96I99 432 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 GLT8D2Q9H1C3 349 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 HESX1Q9UBX0 185 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 A0A087WWV3 80 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 PLS3P13797 630 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 ARHGDIAP52565 204 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 CYP4A11Q02928 519 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 CSRNP1Q96S65 589 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 HACD3Q9P035 362 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 PNMA6EA0A0J9YXQ4 647 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 MAFGO15525 162 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 CASP14P31944 242 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 POLGP54098 1239 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-202ENST00000358392 PPARAQ07869 468 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 SDR42E1Q8WUS8 393 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 RAPGEF5Q92565 580 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 IWS1Q96ST2 819 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 PSTPIP2Q9H939 334 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 SLC24A3Q9HC58 644 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 MED4Q9NPJ6 270 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 PDE6AP16499 860 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 BASP1P80723 227 aaKnown RBP12.16□□□□□ -0.46
COL11A1-202ENST00000358392 C16orf87Q6PH81 154 aa12.16□□□□□ -0.46
COL11A1-202ENST00000358392 SYMPKQ92797 1274 aaKnown RBP12.16□□□□□ -0.46
COL11A1-202ENST00000358392 SGSM2O43147 1006 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 NSFP46459 744 aaKnown RBP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 YWHAHQ04917 246 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 ZBTB8OSQ8IWT0 167 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 CNOT6LQ96LI5 555 aaKnown RBP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 PDE8AO60658 829 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 UBXN2AP68543 259 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 MRPS25P82663 173 aaKnown RBP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 RBL2Q08999 1139 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 POLA2Q14181 598 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 GRAMD1BQ3KR37 738 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 SPOPLQ6IQ16 392 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 GADL1Q6ZQY3 521 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 EPN1Q9Y6I3 576 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 XPAP23025 273 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 RAP1GDS1P52306 607 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 CACNB1Q02641 598 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 KIF19Q2TAC6 998 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 Q3C1V9 767 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 SGO2Q562F6 1265 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 ADGRL1O94910 1474 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 GOLGA8SH3BPF8 625 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 LARGE2Q8N3Y3 721 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 CCDC124Q96CT7 223 aaKnown RBP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 ITM2BQ9Y287 266 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 CTNND1O60716 968 aaKnown RBP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 FTCDO95954 541 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 CCDC85BQ15834 202 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 ADALQ6DHV7 355 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 FAM186BQ8IYM0 893 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 ZNF654Q8IZM8 581 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 BLIDQ8IZY5 108 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 METTL22Q9BUU2 404 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-202ENST00000358392 SMYD3Q9H7B4 428 aa12.15□□□□□ -0.46
COL11A1-202ENST00000358392 MAPK4P31152 587 aa12.15□□□□□ -0.47
COL11A1-202ENST00000358392 PPP1R16BQ96T49 567 aa12.15□□□□□ -0.47
COL11A1-202ENST00000358392 ANKRD65E5RJM6 399 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 PDHA1P08559 390 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 KITP10721 976 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 TCP1P17987 556 aaKnown RBP12.14□□□□□ -0.47
COL11A1-202ENST00000358392 EXOC3L4Q17RC7 722 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms