RNA–Protein interactions for RNA: ENST00000356020.2

LINC01565-201, Transcript of long intergenic non-protein coding RNA 1565, humanhuman

TSL 2 BASIC

Gene LINC01565, Length 2,697 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01565-201ENST00000356020 NOP2P46087 812 aaKnown RBP17.41■□□□□ 0.38
LINC01565-201ENST00000356020 COBLL1Q53SF7 1204 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 FIGNQ5HY92 759 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 ANKRD40Q6AI12 368 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 NHEJ1Q9H9Q4 299 aaPredicted RBP17.41■□□□□ 0.38
LINC01565-201ENST00000356020 TFR2Q9UP52 801 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 DDX60LQ5H9U9 1706 aaKnown RBP17.41■□□□□ 0.38
LINC01565-201ENST00000356020 A0A1W2PQJ5 194 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 KLRF2D3W0D1 207 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 MTIF2P46199 727 aaKnown RBP17.41■□□□□ 0.38
LINC01565-201ENST00000356020 CDK17Q00537 523 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 LETM2Q2VYF4 491 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 SMIM5Q71RC9 77 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 ZSCAN29Q8IWY8 852 aaPredicted RBP17.41■□□□□ 0.38
LINC01565-201ENST00000356020 ERGIC2Q96RQ1 377 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 MMS19Q96T76 1030 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 SRP68Q9UHB9 627 aaKnown RBP17.41■□□□□ 0.38
LINC01565-201ENST00000356020 FAN1Q9Y2M0 1017 aa17.41■□□□□ 0.38
LINC01565-201ENST00000356020 ANO9A1A5B4 782 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 CCNT1O60563 726 aaKnown RBP17.4■□□□□ 0.38
LINC01565-201ENST00000356020 N4BP1O75113 896 aaKnown RBP17.4■□□□□ 0.38
LINC01565-201ENST00000356020 TM4SF1P30408 202 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 KLK7P49862 253 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 KCNQ4P56696 695 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 STK4Q13043 487 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 MIIPQ5JXC2 388 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 TGFBRAP1Q8WUH2 860 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 PURBQ96QR8 312 aaKnown RBP17.4■□□□□ 0.38
LINC01565-201ENST00000356020 C6orf50Q9HD87 102 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 GOLGA8HP0CJ92 632 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 AMPD3Q01432 767 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 DIXDC1Q155Q3 683 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 TPTE2Q6XPS3 522 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 NEK8Q86SG6 692 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 IQCDQ96DY2 449 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 NOC4LQ9BVI4 516 aaKnown RBP17.4■□□□□ 0.38
LINC01565-201ENST00000356020 VIPAS39Q9H9C1 493 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 ZNF287Q9HBT7 754 aa17.4■□□□□ 0.38
LINC01565-201ENST00000356020 TARSL2A2RTX5 802 aaKnown RBP17.39■□□□□ 0.37
LINC01565-201ENST00000356020 LRRIQ3A6PVS8 624 aaPredicted RBP17.39■□□□□ 0.37
LINC01565-201ENST00000356020 GNA11P29992 359 aa17.39■□□□□ 0.37
LINC01565-201ENST00000356020 ORC2Q13416 577 aaPredicted RBP17.39■□□□□ 0.37
LINC01565-201ENST00000356020 MAP9Q49MG5 647 aa17.39■□□□□ 0.37
LINC01565-201ENST00000356020 CNNM4Q6P4Q7 775 aa17.39■□□□□ 0.37
LINC01565-201ENST00000356020 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
LINC01565-201ENST00000356020 PCMTD1Q96MG8 357 aaPredicted RBP17.39■□□□□ 0.37
LINC01565-201ENST00000356020 LACRTQ9GZZ8 138 aa17.39■□□□□ 0.37
LINC01565-201ENST00000356020 RCCD1A6NED2 376 aa17.39■□□□□ 0.37
LINC01565-201ENST00000356020 SMCO2A6NFE2 343 aa17.39■□□□□ 0.37
LINC01565-201ENST00000356020 FCER1AP12319 257 aa17.39■□□□□ 0.37
LINC01565-201ENST00000356020 FKBP15Q5T1M5 1219 aa17.39■□□□□ 0.37
LINC01565-201ENST00000356020 CCDC102AQ96A19 550 aa17.39■□□□□ 0.37
LINC01565-201ENST00000356020 SRGAP2O75044 1071 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 RPS6KA4O75676 772 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 LDHCP07864 332 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 VAV2P52735 878 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 RC3H1Q5TC82 1133 aaKnown RBP17.38■□□□□ 0.37
LINC01565-201ENST00000356020 MMTAG2Q9BU76 263 aaKnown RBP17.38■□□□□ 0.37
LINC01565-201ENST00000356020 TSGA10Q9BZW7 698 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 LEMD3Q9Y2U8 911 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 GRIK5Q16478 980 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 MAPKAPK5Q8IW41 473 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 KIAA0895Q8NCT3 520 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 EEF2KMTQ96G04 330 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 CALML4Q96GE6 196 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 CPVLQ9H3G5 476 aa17.38■□□□□ 0.37
LINC01565-201ENST00000356020 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
LINC01565-201ENST00000356020 NUTM2BA6NNL0 878 aaPredicted RBP17.37■□□□□ 0.37
LINC01565-201ENST00000356020 NUTM2EB1AL46 878 aaPredicted RBP17.37■□□□□ 0.37
LINC01565-201ENST00000356020 ZPR1O75312 459 aa17.37■□□□□ 0.37
LINC01565-201ENST00000356020 TECP42680 631 aa17.37■□□□□ 0.37
LINC01565-201ENST00000356020 MAPK8IP2Q13387 824 aaPredicted RBP17.37■□□□□ 0.37
LINC01565-201ENST00000356020 SOGA3Q5TF21 947 aa17.37■□□□□ 0.37
LINC01565-201ENST00000356020 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
LINC01565-201ENST00000356020 CAPZA3Q96KX2 299 aa17.37■□□□□ 0.37
LINC01565-201ENST00000356020 SAP30BPQ9UHR5 308 aaKnown RBP17.37■□□□□ 0.37
LINC01565-201ENST00000356020 SMARCA1P28370 1054 aa17.37■□□□□ 0.37
LINC01565-201ENST00000356020 AARSP49588 968 aaKnown RBP eCLIP17.37■□□□□ 0.37
LINC01565-201ENST00000356020 C16orf86Q6ZW13 317 aa17.37■□□□□ 0.37
LINC01565-201ENST00000356020 CERS3Q8IU89 383 aa17.37■□□□□ 0.37
LINC01565-201ENST00000356020 EYA3Q99504 573 aa17.37■□□□□ 0.37
LINC01565-201ENST00000356020 RTFDC1Q9BY42 306 aaPredicted RBP17.37■□□□□ 0.37
LINC01565-201ENST00000356020 YY1AP1Q9H869 796 aa17.37■□□□□ 0.37
LINC01565-201ENST00000356020 ANKIB1Q9P2G1 1089 aa17.37■□□□□ 0.37
LINC01565-201ENST00000356020 SEC63Q9UGP8 760 aaKnown RBP17.37■□□□□ 0.37
LINC01565-201ENST00000356020 KIF5AQ12840 1032 aa17.36■□□□□ 0.37
LINC01565-201ENST00000356020 TTC31Q49AM3 519 aaPredicted RBP17.36■□□□□ 0.37
LINC01565-201ENST00000356020 CENPPQ6IPU0 288 aa17.36■□□□□ 0.37
LINC01565-201ENST00000356020 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
LINC01565-201ENST00000356020 ESYT2A0FGR8 921 aa17.36■□□□□ 0.37
LINC01565-201ENST00000356020 HNRNPH3P31942 346 aaKnown RBP17.36■□□□□ 0.37
LINC01565-201ENST00000356020 CDK8P49336 464 aa17.36■□□□□ 0.37
LINC01565-201ENST00000356020 ZNF804AQ7Z570 1209 aa17.36■□□□□ 0.37
LINC01565-201ENST00000356020 FNBP4Q8N3X1 1017 aaPredicted RBP17.36■□□□□ 0.37
LINC01565-201ENST00000356020 CAGE1Q8TC20 777 aa17.36■□□□□ 0.37
LINC01565-201ENST00000356020 TBCKQ8TEA7 893 aa17.36■□□□□ 0.37
LINC01565-201ENST00000356020 PPM1EQ8WY54 764 aa17.36■□□□□ 0.37
LINC01565-201ENST00000356020 SECISBP2LQ93073 1101 aaKnown RBP17.36■□□□□ 0.37
LINC01565-201ENST00000356020 SEMA6BQ9H3T3 888 aa17.36■□□□□ 0.37
LINC01565-201ENST00000356020 IDEP14735 1019 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms