RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 AK8Q96MA6 479 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 MYH1P12882 1939 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 SMCO2A6NFE2 343 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 LGALS16A8MUM7 142 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 MAP2K7O14733 419 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 C21orf2O43822 256 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 PLCG1P19174 1290 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 EEF1GP26641 437 aaKnown RBP18.01■□□□□ 0.47
USHBP1-202ENST00000324554 RHBDL3P58872 404 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 SEMA3FQ13275 785 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 PICALMQ13492 652 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 NONOQ15233 471 aaKnown RBP eCLIP18.01■□□□□ 0.47
USHBP1-202ENST00000324554 CABP7Q86V35 215 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 CEP95Q96GE4 821 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 CUEDC2Q9H467 287 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 THAP9Q9H5L6 903 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 REXO2Q9Y3B8 237 aaKnown RBP18.01■□□□□ 0.47
USHBP1-202ENST00000324554 SRCAPQ6ZRS2 3230 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 H3BQF6 201 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 PSMA7O14818 248 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 STIM1Q13586 685 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 BEND6Q5SZJ8 279 aaPredicted RBP18■□□□□ 0.47
USHBP1-202ENST00000324554 MB21D1Q8N884 522 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 MSANTD4Q8NCY6 345 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 NEK11Q8NG66 645 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 TRIM47Q96LD4 638 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 NAPGQ99747 312 aaPredicted RBP18■□□□□ 0.47
USHBP1-202ENST00000324554 MAGEF1Q9HAY2 307 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 C6orf50Q9HD87 102 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 RAB21Q9UL25 225 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 PCDHAC2Q9Y5I4 1007 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 GNA11P29992 359 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 GYS2P54840 703 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 TTI2Q6NXR4 508 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 ZNF507Q8TCN5 953 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 RRP36Q96EU6 259 aaKnown RBP18■□□□□ 0.47
USHBP1-202ENST00000324554 TRIM10Q9UDY6 481 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 DAGLAQ9Y4D2 1042 aa18■□□□□ 0.47
USHBP1-202ENST00000324554 TTC26A0AVF1 554 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 PLCG2P16885 1265 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 AOC3Q16853 763 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 NEK8Q86SG6 692 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 TBC1D22AQ8WUA7 517 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 HNRNPLLQ8WVV9 542 aaKnown RBP17.99■□□□□ 0.47
USHBP1-202ENST00000324554 A0A1W2PQC6 194 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 NOVP48745 357 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 TUBB2AQ13885 445 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 FAM163AQ96GL9 167 aaPredicted RBP17.99■□□□□ 0.47
USHBP1-202ENST00000324554 PIGSQ96S52 555 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 TUBB2BQ9BVA1 445 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 TRIM9Q9C026 710 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 SUGCTQ9HAC7 445 aa17.99■□□□□ 0.47
USHBP1-202ENST00000324554 SEC63Q9UGP8 760 aaKnown RBP17.99■□□□□ 0.47
USHBP1-202ENST00000324554 ZBTB7AO95365 584 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 RHOXF2BP0C7M4 288 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 SMARCA1P28370 1054 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 AMPD2Q01433 879 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 STYK1Q6J9G0 422 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 ZBTB9Q96C00 473 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 RHOXF2Q9BQY4 288 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 VAT1LQ9HCJ6 419 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 GAKO14976 1311 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 NDUFA10O95299 355 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 HNRNPH2P55795 449 aaKnown RBP17.98■□□□□ 0.47
USHBP1-202ENST00000324554 SOGA3Q5TF21 947 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 KIAA0825Q8IV33 1275 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 TBCKQ8TEA7 893 aa17.98■□□□□ 0.47
USHBP1-202ENST00000324554 DHTKD1Q96HY7 919 aaPredicted RBP17.98■□□□□ 0.47
USHBP1-202ENST00000324554 DUSP9Q99956 384 aaKnown RBP17.98■□□□□ 0.47
USHBP1-202ENST00000324554 EPN1Q9Y6I3 576 aaPredicted RBP17.98■□□□□ 0.47
USHBP1-202ENST00000324554 TECP42680 631 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 NOA1Q8NC60 698 aaKnown RBP17.97■□□□□ 0.47
USHBP1-202ENST00000324554 DNAJC7Q99615 494 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 ABCB6Q9NP58 842 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 MYO1AQ9UBC5 1043 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 MAGEC2Q9UBF1 373 aaPredicted RBP17.97■□□□□ 0.47
USHBP1-202ENST00000324554 TFR2Q9UP52 801 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 RGPD3A6NKT7 1758 aaPredicted RBP17.97■□□□□ 0.47
USHBP1-202ENST00000324554 RGPD4Q7Z3J3 1758 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 USP17L5A8MUK1 530 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 PES1O00541 588 aaKnown RBP17.97■□□□□ 0.47
USHBP1-202ENST00000324554 SLURP2P0DP57 97 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 VSNL1P62760 191 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 MCM6Q14566 821 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 NCAPH2Q6IBW4 605 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 CSGALNACT2Q8N6G5 542 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 OR8K1Q8NGG5 319 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 NOC3LQ8WTT2 800 aaKnown RBP17.97■□□□□ 0.47
USHBP1-202ENST00000324554 C7orf25Q9BPX7 421 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 UBA5Q9GZZ9 404 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 GUCA1BQ9UMX6 200 aa17.97■□□□□ 0.47
USHBP1-202ENST00000324554 LUC7L2Q9Y383 392 aaKnown RBP17.97■□□□□ 0.47
USHBP1-202ENST00000324554 CTAGE15A4D2H0 777 aa17.96■□□□□ 0.47
USHBP1-202ENST00000324554 ECE2O60344 883 aa17.96■□□□□ 0.47
USHBP1-202ENST00000324554 CTAGE8P0CG41 777 aa17.96■□□□□ 0.47
USHBP1-202ENST00000324554 PDE4DQ08499 809 aa17.96■□□□□ 0.47
USHBP1-202ENST00000324554 STK4Q13043 487 aa17.96■□□□□ 0.47
USHBP1-202ENST00000324554 WHAMMP3Q1A5X7 153 aa17.96■□□□□ 0.47
USHBP1-202ENST00000324554 WDR59Q6PJI9 974 aa17.96■□□□□ 0.47
USHBP1-202ENST00000324554 CTAGE6Q86UF2 777 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms