RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 FDX1P10109 184 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 CTSWP56202 376 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 DYNC1I2Q13409 638 aaKnown RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 NAA25Q14CX7 972 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 VSIG1Q86XK7 387 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 CHURC1Q8WUH1 139 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 SYN2Q92777 582 aaPredicted RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 WDR11Q9BZH6 1224 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 ADGRB1O14514 1584 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 PTPRMP28827 1452 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 CTIFO43310 598 aaKnown RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 CCT6AP40227 531 aaKnown RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 NEK9Q8TD19 979 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 CCDC124Q96CT7 223 aaKnown RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 FNBP1Q96RU3 617 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 NUMA1Q14980 2115 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 TAP1Q03518 808 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 TEDDM1Q5T9Z0 273 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 MAP7D3Q8IWC1 876 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 GBP5Q96PP8 586 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 CARD6Q9BX69 1037 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 CDHR2Q9BYE9 1310 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 RASGRF2O14827 1237 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 IL6STP40189 918 aaPredicted RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 CLEC4GQ6UXB4 293 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 PHACTR1Q9C0D0 580 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 FAM83GA6ND36 823 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 HSPD1P10809 573 aaKnown RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 RFC4P35249 363 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 LONRF2Q1L5Z9 754 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 LINC00301Q8NCQ3 95 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 POP5Q969H6 163 aaKnown RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 ZHX2Q9Y6X8 837 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 RPN1P04843 607 aaKnown RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 HHATQ5VTY9 493 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 LRWD1Q9UFC0 647 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 INTUQ9ULD6 942 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 DUOX1Q9NRD9 1551 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 PRPF3O43395 683 aaKnown RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 CCNT1O60563 726 aaKnown RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 TAF5LO75529 589 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 ALKBH8Q96BT7 664 aaKnown RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 PCDHA7Q9UN72 937 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 LEMD3Q9Y2U8 911 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 SEC24BO95487 1268 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 GUCY1B3Q02153 619 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 TRIM28Q13263 835 aaKnown RBP9.63□□□□□ -0.87
COL6A5-202ENST00000312481 AP1ARQ63HQ0 302 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 SGMS1Q86VZ5 419 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 OLFM3Q96PB7 478 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 MACROD2A1Z1Q3 448 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 ZNF233A6NK53 670 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 KYAT1Q16773 422 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 HADHQ16836 314 aaKnown RBP9.62□□□□□ -0.87
COL6A5-202ENST00000312481 IPO4Q8TEX9 1081 aaKnown RBP9.62□□□□□ -0.87
COL6A5-202ENST00000312481 FMO2Q99518 471 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 YY1AP1Q9H869 796 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 MIS18AQ9NYP9 233 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 FAM169AQ9Y6X4 670 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 TNKSO95271 1327 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 RHOXF2BP0C7M4 288 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 TTC13Q8NBP0 860 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 IFT81Q8WYA0 676 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 RHOXF2Q9BQY4 288 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 MMP1P03956 469 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 ALDH1B1P30837 517 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 DZIP3Q86Y13 1208 aaKnown RBP9.62□□□□□ -0.87
COL6A5-202ENST00000312481 SAMM50Q9Y512 469 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 DCCP43146 1447 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 GOLGA8MH3BSY2 632 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 H2AFZP0C0S5 128 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 SPDYCQ5MJ68 293 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 H2AFVQ71UI9 128 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 THRAP3Q9Y2W1 955 aaKnown RBP9.62□□□□□ -0.87
COL6A5-202ENST00000312481 COPB1P53618 953 aaKnown RBP9.62□□□□□ -0.87
COL6A5-202ENST00000312481 TCIRG1Q13488 830 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 DHX34Q14147 1143 aaKnown RBP9.62□□□□□ -0.87
COL6A5-202ENST00000312481 TEX9Q8N6V9 391 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 DDX23Q9BUQ8 820 aaKnown RBP9.62□□□□□ -0.87
COL6A5-202ENST00000312481 TRIM62Q9BVG3 475 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 STX2P32856 288 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 CDK17Q00537 523 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 AP3B2Q13367 1082 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 ARHGEF35A5YM69 484 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 ZWINTO95229 277 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 CYP2E1P05181 493 aaPredicted RBP9.62□□□□□ -0.87
COL6A5-202ENST00000312481 ESRRGP62508 458 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 DGKHQ86XP1 1220 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 CEP120Q8N960 986 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 BCAS4Q8TDM0 211 aa9.62□□□□□ -0.87
COL6A5-202ENST00000312481 ZNF526Q8TF50 670 aaPredicted RBP9.62□□□□□ -0.87
COL6A5-202ENST00000312481 THOC1Q96FV9 657 aaKnown RBP9.62□□□□□ -0.87
COL6A5-202ENST00000312481 GOLGA8JA6NMD2 632 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 KRIT1O00522 736 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 PNMA6AP0CW24 399 aaPredicted RBP9.61□□□□□ -0.87
COL6A5-202ENST00000312481 GFAPP14136 432 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 PDIA3P30101 505 aaKnown RBP9.61□□□□□ -0.87
COL6A5-202ENST00000312481 NECTIN1Q15223 517 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 RTCBQ9Y3I0 505 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms