RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 SYNGAP1Q96PV0 1343 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 CIAO1O76071 339 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 METTL22Q9BUU2 404 aaPredicted RBP9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 LRRC7Q96NW7 1537 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 GFPT2O94808 682 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 KRT33BQ14525 404 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 KIF22Q14807 665 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 FBXO38Q6PIJ6 1188 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 TRIM45Q9H8W5 580 aaPredicted RBP9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 MYH8P13535 1937 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 XRCC5P13010 732 aaKnown RBP9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 PRKCQQ04759 706 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 TTC38Q5R3I4 469 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 HHATQ5VTY9 493 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 TEX9Q8N6V9 391 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 IVNS1ABPQ9Y6Y0 642 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 TSPOAP1O95153 1857 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 SMCO2A6NFE2 343 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 PODXLO00592 558 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 CREB3O43889 395 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 GSTA2P09210 222 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 NR1D1P20393 614 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 ARMC2Q8NEN0 867 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 TTC25Q96NG3 672 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 CDCA7Q9BWT1 371 aaPredicted RBP9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 UBN2Q6ZU65 1347 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 SNTNA6NMZ2 147 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 F6X3S4 739 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 GUCY1B3Q02153 619 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 CASP8Q14790 479 aa9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 LRRC23Q53EV4 343 aaPredicted RBP9.12□□□□□ -0.95
CACNA1D-201ENST00000288139 SLFN14P0C7P3 912 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 MARCKSP29966 332 aaPredicted RBP9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 NME9Q86XW9 330 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 MCF2L2Q86YR7 1114 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 C8orf58Q8NAV2 365 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 ZKSCAN3Q9BRR0 538 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 MAGI3Q5TCQ9 1506 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 GSTA1P08263 222 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 PUM3Q15397 648 aaKnown RBP9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 ASIC2Q16515 512 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 PLA2G4DQ86XP0 818 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 IFT122Q9HBG6 1241 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 RASGRF2O14827 1237 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 NAPAP54920 295 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 NOP9Q86U38 636 aaKnown RBP9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 ANAPC5Q9UJX4 755 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 CHPF2Q9P2E5 772 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 CDC42BPGQ6DT37 1551 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 PFKFB1P16118 471 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 SLC9C2Q5TAH2 1124 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 CC2D1AQ6P1N0 951 aaPredicted RBP9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 REXO1Q8N1G1 1221 aaKnown RBP9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 DHX58Q96C10 678 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 TRERF1Q96PN7 1200 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 THUMPD2Q9BTF0 503 aaKnown RBP9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 NYXQ9GZU5 481 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 STAT1P42224 750 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 THAP9Q9H5L6 903 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 ZFYVE16Q7Z3T8 1539 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 MLH3Q9UHC1 1453 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 SPOPO43791 374 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 PDCLQ13371 301 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 C16orf62Q7Z3J2 963 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 SRRM1Q8IYB3 904 aaKnown RBP9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 RBM46Q8TBY0 533 aaKnown RBP9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 CCDC8Q9H0W5 538 aaPredicted RBP9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 L2HGDHQ9H9P8 463 aa9.11□□□□□ -0.95
CACNA1D-201ENST00000288139 A0A1W2PQC6 194 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 SMAPO00193 183 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 TEX28O15482 410 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 KRT40Q6A162 431 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 LRRC43Q8N309 656 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 NEK9Q8TD19 979 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 DDX54Q8TDD1 881 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 MRPL46Q9H2W6 279 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 ZNF212Q9UDV6 495 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 POLR2DO15514 142 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 KLHL30Q0D2K2 578 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 TEX11Q8IYF3 940 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 KCND1Q9NSA2 647 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 RIPOR2Q9Y4F9 1068 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 TRAF5O00463 557 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 DDX5P17844 614 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 AFMP43652 599 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 KPNA2P52292 529 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 MRPS35P82673 323 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 EIF4A2Q14240 407 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 TNNI3KQ59H18 835 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 PLBD2Q8NHP8 589 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 MYD88Q99836 296 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 NBPF3Q9H094 633 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 USP40Q9NVE5 1235 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 FPGT-TNNI3KV9GXZ4 949 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 MYL6BP14649 208 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 CADPS2Q86UW7 1296 aa9.1□□□□□ -0.95
CACNA1D-201ENST00000288139 DIS3L2Q8IYB7 885 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms