RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CYLC1P35663 651 aaPredicted RBP11.56□□□□□ -0.56
SKA1-201ENST00000285116 GGCXP38435 758 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 CCT5P48643 541 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 PSEN1P49768 467 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 LIG3P49916 1009 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 DTHD1Q6ZMT9 781 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 FNBP4Q8N3X1 1017 aaPredicted RBP11.56□□□□□ -0.56
SKA1-201ENST00000285116 KAT2BQ92831 832 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 CHP1Q99653 195 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 C7orf25Q9BPX7 421 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 ZNF219Q9P2Y4 722 aaPredicted RBP11.56□□□□□ -0.56
SKA1-201ENST00000285116 RGS17Q9UGC6 210 aaPredicted RBP11.56□□□□□ -0.56
SKA1-201ENST00000285116 MINPP1Q9UNW1 487 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 GDAQ9Y2T3 454 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 SAR1BQ9Y6B6 198 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 FLT1P17948 1338 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 CYP2D7A0A087X1C5 515 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 LOC102724428A0A0B4J2F2 783 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 hCG_1642624A0A1W2PR95 340 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 GOLGA6CA6NDK9 693 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 KRT86O43790 486 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 CLSTN1O94985 981 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 LCA5LO95447 670 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 GOLGA6DP0CG33 693 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 CDC25AP30304 524 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 HNRNPH1P31943 449 aaKnown RBP11.56□□□□□ -0.56
SKA1-201ENST00000285116 SIK1P57059 783 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 PPFIA1Q13136 1202 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 TSR1Q2NL82 804 aaKnown RBP11.56□□□□□ -0.56
SKA1-201ENST00000285116 GBP6Q6ZN66 633 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 FAM205AQ6ZU69 1335 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 DUSP9Q99956 384 aaKnown RBP11.56□□□□□ -0.56
SKA1-201ENST00000285116 CXorf56Q9H5V9 222 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 KAT14Q9H8E8 782 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 EXOC1Q9NV70 894 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 GOLGA6AQ9NYA3 693 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 IRS2Q9Y4H2 1338 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 SHTN1A0MZ66 631 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 CCNE1P24864 410 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 SMARCA1P28370 1054 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 MAP2K2P36507 400 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 MNAT1P51948 309 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 MECOMQ03112 1051 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 IQCEQ6IPM2 695 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 RPAINQ86UA6 219 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 CNKSR2Q8WXI2 1034 aa11.56□□□□□ -0.56
SKA1-201ENST00000285116 ZNHIT6Q9NWK9 470 aaKnown RBP11.56□□□□□ -0.56
SKA1-201ENST00000285116 MAGEC2Q9UBF1 373 aaPredicted RBP11.56□□□□□ -0.56
SKA1-201ENST00000285116 FOCADQ5VW36 1801 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 SKIDA1Q1XH10 827 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 RIN2Q8WYP3 895 aaPredicted RBP11.55□□□□□ -0.56
SKA1-201ENST00000285116 STAMQ92783 540 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 LRRC4BQ9NT99 713 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 PCDHA6Q9UN73 950 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 PCDHA8Q9Y5H6 950 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 RASSF10A6NK89 507 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 AGPSO00116 658 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 GNPATO15228 680 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 CNNM4Q6P4Q7 775 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 P2RX5Q93086 422 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 MMS19Q96T76 1030 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 ANKRD2Q9GZV1 360 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 BARHL2Q9NY43 387 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 NHSQ6T4R5 1651 aa11.55□□□□□ -0.56
SKA1-201ENST00000285116 GOLGA6BA6NDN3 693 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 INPP5BP32019 993 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 PMS1P54277 932 aaKnown RBP11.54□□□□□ -0.56
SKA1-201ENST00000285116 MMGT1Q8N4V1 131 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 CCDC47Q96A33 483 aaKnown RBP11.54□□□□□ -0.56
SKA1-201ENST00000285116 JAKMIP2Q96AA8 810 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 SELENOOQ9BVL4 669 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 CAPS2Q9BXY5 557 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 MAD2L2Q9UI95 211 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 JAG2Q9Y219 1238 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 A6NNZ2 444 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 STXBP3O00186 592 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 ADAMTS3O15072 1205 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 EIF3HO15372 352 aaKnown RBP eCLIP11.54□□□□□ -0.56
SKA1-201ENST00000285116 CCDC172P0C7W6 258 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 TUBB8Q3ZCM7 444 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 CCDC122Q5T0U0 273 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 C12orf60Q5U649 245 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 SPTY2D1Q68D10 685 aaPredicted RBP11.54□□□□□ -0.56
SKA1-201ENST00000285116 CCNI2Q6ZMN8 369 aaPredicted RBP11.54□□□□□ -0.56
SKA1-201ENST00000285116 CNPY4Q8N129 248 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 BCAS4Q8TDM0 211 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 TUBGCP2Q9BSJ2 902 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 SPZ1Q9BXG8 430 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
SKA1-201ENST00000285116 PPP1R1BQ9UD71 204 aaPredicted RBP11.54□□□□□ -0.56
SKA1-201ENST00000285116 GUCA1BQ9UMX6 200 aa11.54□□□□□ -0.56
SKA1-201ENST00000285116 ATXN2Q99700 1313 aaKnown RBP11.53□□□□□ -0.56
SKA1-201ENST00000285116 CCDC194A0A1B0GVG4 234 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 ATP1A1P05023 1023 aaKnown RBP11.53□□□□□ -0.56
SKA1-201ENST00000285116 TNFRSF8P28908 595 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 VAV2P52735 878 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 EN1Q05925 392 aaPredicted RBP11.53□□□□□ -0.56
SKA1-201ENST00000285116 MIIPQ5JXC2 388 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 LINC00116Q8NCU8 138 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 SECISBP2LQ93073 1101 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms