RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 CEP89Q96ST8 783 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 PHF20Q9BVI0 1012 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 KRT23Q9C075 422 aa12.68□□□□□ -0.38
SCLT1-201ENST00000281142 FHDC1Q9C0D6 1143 aaPredicted RBP12.68□□□□□ -0.38
SCLT1-201ENST00000281142 ARAP2Q8WZ64 1704 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 TNKSO95271 1327 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 ERICH2A1L162 156 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 GNGT1P63211 74 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 NPY5RQ15761 445 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 TTC38Q5R3I4 469 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 KCNV1Q6PIU1 500 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 KRT26Q7Z3Y9 468 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 MB21D1Q8N884 522 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 BCAS4Q8TDM0 211 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 SDR42E1Q8WUS8 393 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 PLIN2Q99541 437 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 JADE2Q9NQC1 790 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 LUC7L2Q9Y383 392 aaKnown RBP12.67□□□□□ -0.38
SCLT1-201ENST00000281142 NID2Q14112 1375 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 CYP2D7A0A087X1C5 515 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 ERLIN2O94905 339 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 MCM7P33993 719 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 PPARDQ03181 441 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 TSEN2Q8NCE0 465 aaKnown RBP12.67□□□□□ -0.38
SCLT1-201ENST00000281142 CNKSR1Q969H4 720 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 ARL8AQ96BM9 186 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 LRRC1Q9BTT6 524 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 CNNM2Q9H8M5 875 aa12.67□□□□□ -0.38
SCLT1-201ENST00000281142 RASSF10A6NK89 507 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 B4DLN1 442 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 PLEKP08567 350 aaPredicted RBP12.66□□□□□ -0.38
SCLT1-201ENST00000281142 IDEP14735 1019 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 SPATA5Q8NB90 893 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 STAG1Q8WVM7 1258 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
SCLT1-201ENST00000281142 ATP6V0A2Q9Y487 856 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 MYH10P35580 1976 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 RPN1P04843 607 aaKnown RBP12.66□□□□□ -0.38
SCLT1-201ENST00000281142 ARID4AP29374 1257 aaPredicted RBP12.66□□□□□ -0.38
SCLT1-201ENST00000281142 MAP2K2P36507 400 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 EVX2Q03828 476 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 SP8Q8IXZ3 490 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 TTLL6Q8N841 843 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 AENQ8WTP8 325 aaKnown RBP12.66□□□□□ -0.38
SCLT1-201ENST00000281142 DNAJC7Q99615 494 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 UBAC1Q9BSL1 405 aa12.66□□□□□ -0.38
SCLT1-201ENST00000281142 IQSEC3Q9UPP2 1182 aaPredicted RBP12.66□□□□□ -0.38
SCLT1-201ENST00000281142 PP2D1A8MPX8 630 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 CXCR5P32302 372 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 GPSM2P81274 684 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 FUT2Q10981 343 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 TRIM14Q14142 442 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 ZNF658Q5TYW1 1059 aaPredicted RBP12.65□□□□□ -0.38
SCLT1-201ENST00000281142 PIK3AP1Q6ZUJ8 805 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 SH2D3CQ8N5H7 860 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 ANKRD20A12PQ8NF67 263 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 FERMT2Q96AC1 680 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 CAPS2Q9BXY5 557 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 SUFUQ9UMX1 484 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 DUOX1Q9NRD9 1551 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 TARSL2A2RTX5 802 aaKnown RBP12.65□□□□□ -0.38
SCLT1-201ENST00000281142 ZNF263O14978 683 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 SEC23AQ15436 765 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 ZNF507Q8TCN5 953 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 C7orf43Q8WVR3 580 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 TNFRSF25Q93038 417 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 RNF26Q9BY78 433 aaPredicted RBP12.65□□□□□ -0.38
SCLT1-201ENST00000281142 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 PIM2Q9P1W9 311 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 CAPN6Q9Y6Q1 641 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 MYH2Q9UKX2 1941 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 CCDC196A0A1B0GTZ2 297 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 LGALS16A8MUM7 142 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 EBAG9O00559 213 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
SCLT1-201ENST00000281142 FGFR2P21802 821 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 ATP2C1P98194 919 aaPredicted RBP12.65□□□□□ -0.38
SCLT1-201ENST00000281142 SPAG1Q07617 926 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 PDCLQ13371 301 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 TTMPQ5BVD1 217 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 ADGRA1Q86SQ6 560 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 NHEJ1Q9H9Q4 299 aaPredicted RBP12.65□□□□□ -0.38
SCLT1-201ENST00000281142 ANKIB1Q9P2G1 1089 aa12.65□□□□□ -0.38
SCLT1-201ENST00000281142 C21orf2O43822 256 aa12.64□□□□□ -0.39
SCLT1-201ENST00000281142 HNRNPH1P31943 449 aaKnown RBP12.64□□□□□ -0.39
SCLT1-201ENST00000281142 PUM3Q15397 648 aaKnown RBP12.64□□□□□ -0.39
SCLT1-201ENST00000281142 KCTD16Q68DU8 428 aa12.64□□□□□ -0.39
SCLT1-201ENST00000281142 TMC4Q7Z404 712 aa12.64□□□□□ -0.39
SCLT1-201ENST00000281142 ENAHQ8N8S7 591 aaPredicted RBP12.64□□□□□ -0.39
SCLT1-201ENST00000281142 LRWD1Q9UFC0 647 aa12.64□□□□□ -0.39
SCLT1-201ENST00000281142 CAPN11Q9UMQ6 739 aa12.64□□□□□ -0.39
SCLT1-201ENST00000281142 EIF3HO15372 352 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCLT1-201ENST00000281142 ATP1A2P50993 1020 aa12.64□□□□□ -0.39
SCLT1-201ENST00000281142 CKAP4Q07065 602 aaKnown RBP12.64□□□□□ -0.39
SCLT1-201ENST00000281142 MAP3K12Q12852 859 aa12.64□□□□□ -0.39
SCLT1-201ENST00000281142 PPFIA1Q13136 1202 aa12.64□□□□□ -0.39
SCLT1-201ENST00000281142 CREG2Q8IUH2 290 aa12.64□□□□□ -0.39
SCLT1-201ENST00000281142 ZNF512BQ96KM6 892 aaPredicted RBP12.64□□□□□ -0.39
SCLT1-201ENST00000281142 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
SCLT1-201ENST00000281142 SNED1Q8TER0 1413 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms