RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 YDJCA8MPS7 323 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 N4BP3O15049 544 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 ENTPD3O75355 529 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 QRICH1Q2TAL8 776 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 ANKRD7Q92527 254 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 PSTPIP2Q9H939 334 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 TAB2Q9NYJ8 693 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 PSMA7O14818 248 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 PPIP5K2O43314 1243 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 PMS1P54277 932 aaKnown RBP28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 ETF1P62495 437 aaKnown RBP28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 AMPD3Q01432 767 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 ICA1Q05084 483 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 IRF2BP1Q8IU81 584 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 CCDC47Q96A33 483 aaKnown RBP28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 VPS16Q9H269 839 aa28.28■■■□□ 2.12
TMEM55B-201ENST00000250489 RAD21O60216 631 aa28.27■■■□□ 2.12
TMEM55B-201ENST00000250489 ASIC1P78348 528 aa28.27■■■□□ 2.12
TMEM55B-201ENST00000250489 EN1Q05925 392 aaPredicted RBP28.27■■■□□ 2.12
TMEM55B-201ENST00000250489 PDIA5Q14554 519 aa28.27■■■□□ 2.12
TMEM55B-201ENST00000250489 PNMA5Q96PV4 448 aa28.27■■■□□ 2.12
TMEM55B-201ENST00000250489 RAB34Q9BZG1 259 aa28.27■■■□□ 2.12
TMEM55B-201ENST00000250489 ATF5Q9Y2D1 282 aaPredicted RBP28.27■■■□□ 2.12
TMEM55B-201ENST00000250489 COL2A1P02458 1487 aaPredicted RBP28.26■■■□□ 2.12
TMEM55B-201ENST00000250489 GDF11O95390 407 aa28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 NCBP1Q09161 790 aaKnown RBP28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 ABCB5Q2M3G0 1257 aa28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 TRIM65Q6PJ69 517 aa28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 TOGARAM2Q6ZUX3 1019 aa28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 DHTKD1Q96HY7 919 aaPredicted RBP28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 EXOC1Q9NV70 894 aa28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 STK17AQ9UEE5 414 aa28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 ARFGEF1Q9Y6D6 1849 aa28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 MFAP3LO75121 409 aa28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 PDE4DQ08499 809 aa28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 PRMT6Q96LA8 375 aaPredicted RBP28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 BLOC1S4Q9NUP1 217 aa28.26■■■□□ 2.11
TMEM55B-201ENST00000250489 C21orf2O43822 256 aa28.25■■■□□ 2.11
TMEM55B-201ENST00000250489 GYPCP04921 128 aa28.25■■■□□ 2.11
TMEM55B-201ENST00000250489 CDC37Q16543 378 aaPredicted RBP28.25■■■□□ 2.11
TMEM55B-201ENST00000250489 TTI2Q6NXR4 508 aa28.25■■■□□ 2.11
TMEM55B-201ENST00000250489 CPLX3Q8WVH0 158 aa28.25■■■□□ 2.11
TMEM55B-201ENST00000250489 GLT8D2Q9H1C3 349 aa28.25■■■□□ 2.11
TMEM55B-201ENST00000250489 THAP9Q9H5L6 903 aa28.25■■■□□ 2.11
TMEM55B-201ENST00000250489 DDX25Q9UHL0 483 aaKnown RBP28.25■■■□□ 2.11
TMEM55B-201ENST00000250489 PHLPP2Q6ZVD8 1323 aa28.25■■■□□ 2.11
TMEM55B-201ENST00000250489 POTEMA6NI47 508 aa28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 GMCL1P1Q8NEA9 526 aa28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 NAA15Q9BXJ9 866 aaKnown RBP28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 GTPBP4Q9BZE4 634 aaKnown RBP28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 L2HGDHQ9H9P8 463 aa28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 PSME4Q14997 1843 aa28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 MYH7BA7E2Y1 1941 aa28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 GOLGA6L9A6NEM1 432 aa28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 GCFC2P16383 781 aaKnown RBP28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 CASP14P31944 242 aa28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 SV2BQ7L1I2 683 aa28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 TRIM47Q96LD4 638 aa28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 PCDHA1Q9Y5I3 950 aa28.24■■■□□ 2.11
TMEM55B-201ENST00000250489 F5H6K3 240 aa28.23■■■□□ 2.11
TMEM55B-201ENST00000250489 EEF1GP26641 437 aaKnown RBP28.23■■■□□ 2.11
TMEM55B-201ENST00000250489 KLRC3Q07444 240 aa28.23■■■□□ 2.11
TMEM55B-201ENST00000250489 CNGA4Q8IV77 575 aa28.23■■■□□ 2.11
TMEM55B-201ENST00000250489 CCDC51Q96ER9 411 aa28.23■■■□□ 2.11
TMEM55B-201ENST00000250489 STK4Q13043 487 aa28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 CREBRFQ8IUR6 639 aa28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 NOC3LQ8WTT2 800 aaKnown RBP28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 HAS1Q92839 578 aa28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 CDK5RAP3Q96JB5 506 aa28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 ZNF215Q9UL58 517 aaPredicted RBP28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 PPP1R2P41236 205 aa28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 FXR1P51114 621 aaKnown RBP eCLIP28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 JAG1P78504 1218 aa28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 KRT79Q5XKE5 535 aa28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 SNX29Q8TEQ0 813 aa28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 LARP4BQ92615 738 aaKnown RBP28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 P2RX5Q93086 422 aa28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 GMCL1Q96IK5 515 aa28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 NAP1L4Q99733 375 aaKnown RBP28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 DUSP9Q99956 384 aaKnown RBP28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 SRRTQ9BXP5 876 aaKnown RBP28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 DNAI1Q9UI46 699 aa28.22■■■□□ 2.11
TMEM55B-201ENST00000250489 USP17L15C9J2P7 530 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 USP17L13C9JLJ4 530 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 USP17L11C9JVI0 530 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 USP17L18D6R9N7 530 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 USP17L22D6RA61 530 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 USP17L17D6RBQ6 530 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 USP17L19D6RCP7 530 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 USP17L20D6RJB6 530 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 CCNE1P24864 410 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 USP17L24Q0WX57 530 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 MCM6Q14566 821 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 MTF1Q14872 753 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 TMEM119Q4V9L6 283 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 COBLL1Q53SF7 1204 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 USP17L6PQ6QN14 398 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 NUDT12Q9BQG2 462 aa28.21■■■□□ 2.11
TMEM55B-201ENST00000250489 SOWAHDA6NJG2 315 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms