RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 SLC30A10Q6XR72 485 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 CYP2W1Q8TAV3 490 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 CLEC4DQ8WXI8 215 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 SLC10A4Q96EP9 437 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 EPSTI1Q96J88 318 aa14.71□□□□□ -0.05
HIF3A-201ENST00000244302 hCG_1984214I3L0E3 225 aa14.71□□□□□ -0.06
HIF3A-201ENST00000244302 TPM2P07951 284 aa14.71□□□□□ -0.06
HIF3A-201ENST00000244302 COG2Q14746 738 aa14.71□□□□□ -0.06
HIF3A-201ENST00000244302 ZNF713Q8N859 430 aaPredicted RBP14.71□□□□□ -0.06
HIF3A-201ENST00000244302 REPS2Q8NFH8 660 aa14.71□□□□□ -0.06
HIF3A-201ENST00000244302 ENGASEQ8NFI3 743 aa14.71□□□□□ -0.06
HIF3A-201ENST00000244302 GBA2Q9HCG7 927 aaPredicted RBP14.71□□□□□ -0.06
HIF3A-201ENST00000244302 COL20A1Q9P218 1284 aa14.71□□□□□ -0.06
HIF3A-201ENST00000244302 NOL7Q9UMY1 257 aaKnown RBP14.71□□□□□ -0.06
HIF3A-201ENST00000244302 RLFQ13129 1914 aa14.7□□□□□ -0.06
HIF3A-201ENST00000244302 A0A0G2JLL6 359 aaPredicted RBP14.7□□□□□ -0.06
HIF3A-201ENST00000244302 VWA3AA6NCI4 1184 aa14.7□□□□□ -0.06
HIF3A-201ENST00000244302 SPDYE16A6NNV3 312 aaPredicted RBP14.7□□□□□ -0.06
HIF3A-201ENST00000244302 PPP6R2O75170 966 aa14.7□□□□□ -0.06
HIF3A-201ENST00000244302 ICAM1P05362 532 aa14.7□□□□□ -0.06
HIF3A-201ENST00000244302 PTPREP23469 700 aa14.7□□□□□ -0.06
HIF3A-201ENST00000244302 KRT25Q7Z3Z0 450 aa14.7□□□□□ -0.06
HIF3A-201ENST00000244302 PRRT2Q7Z6L0 340 aaPredicted RBP14.7□□□□□ -0.06
HIF3A-201ENST00000244302 POTEDQ86YR6 584 aa14.7□□□□□ -0.06
HIF3A-201ENST00000244302 PDLIM2Q96JY6 352 aa14.7□□□□□ -0.06
HIF3A-201ENST00000244302 PP2D1A8MPX8 630 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 PFKFB1P16118 471 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 PPP1R18Q6NYC8 613 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 LRSAM1Q6UWE0 723 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 NEK8Q86SG6 692 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 CKAP2LQ8IYA6 745 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 KRI1Q8N9T8 703 aaKnown RBP14.69□□□□□ -0.06
HIF3A-201ENST00000244302 UBE2Q2Q8WVN8 375 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 ANO3Q9BYT9 981 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 A0A087X0B3 334 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 MSNP26038 577 aaKnown RBP14.69□□□□□ -0.06
HIF3A-201ENST00000244302 ATP2C1P98194 919 aaPredicted RBP14.69□□□□□ -0.06
HIF3A-201ENST00000244302 PLS1Q14651 629 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 RBSNQ9H1K0 784 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 BTBD7Q9P203 1132 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 ZNF214Q9UL59 606 aaPredicted RBP14.69□□□□□ -0.06
HIF3A-201ENST00000244302 ADAMTS5Q9UNA0 930 aa14.69□□□□□ -0.06
HIF3A-201ENST00000244302 SRPRBQ9Y5M8 271 aaKnown RBP14.69□□□□□ -0.06
HIF3A-201ENST00000244302 PPIL2Q13356 520 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 GPAT2Q6NUI2 795 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 CHADLQ6NUI6 762 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 FMR1NBQ8N0W7 255 aaPredicted RBP14.68□□□□□ -0.06
HIF3A-201ENST00000244302 PDILTQ8N807 584 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 RBM46Q8TBY0 533 aaKnown RBP14.68□□□□□ -0.06
HIF3A-201ENST00000244302 MRPS27Q92552 414 aaKnown RBP14.68□□□□□ -0.06
HIF3A-201ENST00000244302 SYAP1Q96A49 352 aaPredicted RBP14.68□□□□□ -0.06
HIF3A-201ENST00000244302 KCNH4Q9UQ05 1017 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 PTPRFP10586 1907 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 ZBED4O75132 1171 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 CYP2C8P10632 490 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 CMA1P23946 247 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 TRAPPC10P48553 1259 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 TERF1P54274 439 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 SNRNP48Q6IEG0 339 aaKnown RBP14.68□□□□□ -0.06
HIF3A-201ENST00000244302 TRERF1Q96PN7 1200 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 TXNRD2Q9NNW7 524 aa14.68□□□□□ -0.06
HIF3A-201ENST00000244302 FOXN1O15353 648 aa14.67□□□□□ -0.06
HIF3A-201ENST00000244302 Q3C1V9 767 aa14.67□□□□□ -0.06
HIF3A-201ENST00000244302 RESP18Q5W5W9 173 aa14.67□□□□□ -0.06
HIF3A-201ENST00000244302 ASCC2Q9H1I8 757 aaPredicted RBP14.67□□□□□ -0.06
HIF3A-201ENST00000244302 MYH7BA7E2Y1 1941 aa14.67□□□□□ -0.06
HIF3A-201ENST00000244302 A0A1W2PQ27 194 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 A0A1W2PQ64 194 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 A0A1W2PQD8 194 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 FAM86B1E9PN63 330 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 CXCL11O14625 94 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 RRP9O43818 475 aaKnown RBP14.66□□□□□ -0.06
HIF3A-201ENST00000244302 CUTAO60888 179 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 FAM86B2P0C5J1 330 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.66□□□□□ -0.06
HIF3A-201ENST00000244302 CRYGNQ8WXF5 182 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 MS4A4AQ96JQ5 239 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 MRPL11Q9Y3B7 192 aaKnown RBP14.66□□□□□ -0.06
HIF3A-201ENST00000244302 COL11A1P12107 1806 aaPredicted RBP14.66□□□□□ -0.06
HIF3A-201ENST00000244302 GCOM1H8Y6P7 765 aaPredicted RBP14.66□□□□□ -0.06
HIF3A-201ENST00000244302 KIF3CO14782 793 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 ZNF202O95125 648 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 POLR2MP0CAP2 368 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 ARHGAP4P98171 946 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 LONRF3Q496Y0 759 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 NSMFQ6X4W1 530 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 C2orf69Q8N8R5 385 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 IL31RAQ8NI17 732 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 SYMPKQ92797 1274 aaKnown RBP14.66□□□□□ -0.06
HIF3A-201ENST00000244302 HAS1Q92839 578 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 TAAR1Q96RJ0 339 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 PLIN2Q99541 437 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 PAGR1Q9BTK6 254 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 HPSEQ9Y251 543 aa14.66□□□□□ -0.06
HIF3A-201ENST00000244302 CTDP1Q9Y5B0 961 aaPredicted RBP14.66□□□□□ -0.06
HIF3A-201ENST00000244302 PARP14Q460N5 1801 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 SPDYE3A6NKU9 549 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 ECM2O94769 699 aaPredicted RBP14.65□□□□□ -0.06
HIF3A-201ENST00000244302 TECP42680 631 aa14.65□□□□□ -0.06
HIF3A-201ENST00000244302 TXKP42681 527 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms