RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 ISM2Q6H9L7 571 aa16.83■□□□□ 0.28
CCDC47-201ENST00000225726 CCDC39Q9UFE4 941 aa16.83■□□□□ 0.28
CCDC47-201ENST00000225726 PITPNM2Q9BZ72 1349 aa16.83■□□□□ 0.28
CCDC47-201ENST00000225726 SLC37A4O43826 429 aa16.83■□□□□ 0.28
CCDC47-201ENST00000225726 FOSP01100 380 aaPredicted RBP16.83■□□□□ 0.28
CCDC47-201ENST00000225726 USP11P51784 963 aa16.83■□□□□ 0.28
CCDC47-201ENST00000225726 HIRAP54198 1017 aaPredicted RBP16.83■□□□□ 0.28
CCDC47-201ENST00000225726 INPP5BP32019 993 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 AFMP43652 599 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 FXR2P51116 673 aaKnown RBP eCLIP16.82■□□□□ 0.282e-7■■■■□ 21.2
CCDC47-201ENST00000225726 MORC3Q14149 939 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 SARM1Q6SZW1 724 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 SCYL3Q8IZE3 742 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 FAM43AQ8N2R8 423 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 DDX25Q9UHL0 483 aaKnown RBP16.82■□□□□ 0.28
CCDC47-201ENST00000225726 SMTNL1A8MU46 457 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 YBX3P16989 372 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCDC47-201ENST00000225726 STAT6P42226 847 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 DPYDQ12882 1025 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 KARSQ15046 597 aaKnown RBP16.82■□□□□ 0.28
CCDC47-201ENST00000225726 TMEM266Q2M3C6 531 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 IGSF22Q8N9C0 903 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 PP2D1A8MPX8 630 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 LMOD1P29536 600 aaPredicted RBP16.82■□□□□ 0.28
CCDC47-201ENST00000225726 MOXD1Q6UVY6 613 aa16.82■□□□□ 0.28
CCDC47-201ENST00000225726 PIK3CDO00329 1044 aa16.81■□□□□ 0.28
CCDC47-201ENST00000225726 OPLAHO14841 1288 aa16.81■□□□□ 0.28
CCDC47-201ENST00000225726 IKBKBO14920 756 aa16.81■□□□□ 0.28
CCDC47-201ENST00000225726 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
CCDC47-201ENST00000225726 CDC25AP30304 524 aa16.81■□□□□ 0.28
CCDC47-201ENST00000225726 RRAGBQ5VZM2 374 aa16.81■□□□□ 0.28
CCDC47-201ENST00000225726 CABP7Q86V35 215 aa16.81■□□□□ 0.28
CCDC47-201ENST00000225726 DACH1Q9UI36 760 aa16.81■□□□□ 0.28
CCDC47-201ENST00000225726 TECP42680 631 aa16.81■□□□□ 0.28
CCDC47-201ENST00000225726 CCDC174Q6PII3 467 aa16.81■□□□□ 0.28
CCDC47-201ENST00000225726 WDR18Q9BV38 432 aa16.81■□□□□ 0.28
CCDC47-201ENST00000225726 ADARB2Q9NS39 739 aaKnown RBP16.81■□□□□ 0.28
CCDC47-201ENST00000225726 CYP3A7-CYP3A51PA0A087WV96 503 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 GTPBP6O43824 516 aaPredicted RBP16.8■□□□□ 0.28
CCDC47-201ENST00000225726 CYP3A7P24462 503 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 TXKP42681 527 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 USP14P54578 494 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 TPM4P67936 248 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 PLA2G4DQ86XP0 818 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 MLKLQ8NB16 471 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 RASSF8Q8NHQ8 419 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 GSDMAQ96QA5 445 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 WRNIP1Q96S55 665 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 CUEDC2Q9H467 287 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 AS3MTQ9HBK9 375 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 BMP6P22004 513 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 ZNF75DP51815 510 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 CRYGNQ8WXF5 182 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 MBOAT7Q96N66 472 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 RAB34Q9BZG1 259 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 MAGEF1Q9HAY2 307 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 FBXO28Q9NVF7 368 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 MRPL11Q9Y3B7 192 aaKnown RBP16.8■□□□□ 0.28
CCDC47-201ENST00000225726 ABCB11O95342 1321 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 SPDYE3A6NKU9 549 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 PTMAP06454 111 aaKnown RBP16.8■□□□□ 0.28
CCDC47-201ENST00000225726 TAL1P17542 331 aaPredicted RBP16.8■□□□□ 0.28
CCDC47-201ENST00000225726 PDIA5Q14554 519 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 TRIM5Q9C035 493 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 PICK1Q9NRD5 415 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 SSC5DA1L4H1 1573 aa16.8■□□□□ 0.28
CCDC47-201ENST00000225726 SUPT20HL1Q3ZLR7 823 aa16.79■□□□□ 0.28
CCDC47-201ENST00000225726 SLF1Q9BQI6 1058 aa16.79■□□□□ 0.28
CCDC47-201ENST00000225726 SREBF1P36956 1147 aa16.79■□□□□ 0.28
CCDC47-201ENST00000225726 ARHGAP4P98171 946 aa16.79■□□□□ 0.28
CCDC47-201ENST00000225726 PRAMEF18Q5VWM3 479 aa16.79■□□□□ 0.28
CCDC47-201ENST00000225726 C9orf131Q5VYM1 1079 aa16.79■□□□□ 0.28
CCDC47-201ENST00000225726 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.79■□□□□ 0.28
CCDC47-201ENST00000225726 P2RX7Q99572 595 aaKnown RBP16.79■□□□□ 0.28
CCDC47-201ENST00000225726 NAALADL2Q58DX5 795 aa16.79■□□□□ 0.28
CCDC47-201ENST00000225726 PRPF38AQ8NAV1 312 aaKnown RBP16.79■□□□□ 0.28
CCDC47-201ENST00000225726 PTPRAP18433 802 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 MTMR2Q13614 643 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 NCAPHQ15003 741 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 CT47A1Q5JQC4 288 aaPredicted RBP16.78■□□□□ 0.28
CCDC47-201ENST00000225726 LRWD1Q9UFC0 647 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 PHIPQ8WWQ0 1821 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 MYL5Q02045 173 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 NOL9Q5SY16 702 aaKnown RBP16.78■□□□□ 0.28
CCDC47-201ENST00000225726 HAS1Q92839 578 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 MTRQ99707 1265 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 ZHX1Q9UKY1 873 aaPredicted RBP16.78■□□□□ 0.28
CCDC47-201ENST00000225726 ICAM1P05362 532 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 MYL1P05976 194 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 CDC25BP30305 580 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 LDHDQ86WU2 507 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 ZKSCAN4Q969J2 545 aaPredicted RBP16.78■□□□□ 0.28
CCDC47-201ENST00000225726 KLRG1Q96E93 195 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 CALML4Q96GE6 196 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 MMTAG2Q9BU76 263 aaKnown RBP16.78■□□□□ 0.28
CCDC47-201ENST00000225726 EMILIN3Q9NT22 766 aa16.78■□□□□ 0.28
CCDC47-201ENST00000225726 PLCG1P19174 1290 aa16.77■□□□□ 0.28
CCDC47-201ENST00000225726 CASP1P29466 404 aa16.77■□□□□ 0.28
CCDC47-201ENST00000225726 GCOM1H8Y6P7 765 aaPredicted RBP16.77■□□□□ 0.27
CCDC47-201ENST00000225726 POLR2MP0CAP2 368 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms