RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TPM2P07951 284 aa33.42■■■□□ 2.94
PABPN1-201ENST00000216727 POLD1P28340 1107 aa33.42■■■□□ 2.94
PABPN1-201ENST00000216727 CTNND2Q9UQB3 1225 aa33.42■■■□□ 2.94
PABPN1-201ENST00000216727 A0A1B0GTH6 734 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 NRDCO43847 1150 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 RHOBTB3O94955 611 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 PAK1Q13153 545 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 NR1I3Q14994 352 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 TAOK3Q9H2K8 898 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 VEZTQ9HBM0 779 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 DDX25Q9UHL0 483 aaKnown RBP33.41■■■□□ 2.94
PABPN1-201ENST00000216727 TMX2Q9Y320 296 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 KCNJ6P48051 423 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 AP3B2Q13367 1082 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 APTXQ7Z2E3 356 aaKnown RBP33.41■■■□□ 2.94
PABPN1-201ENST00000216727 PRIMPOLQ96LW4 560 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 C7orf25Q9BPX7 421 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 MYH7BA7E2Y1 1941 aa33.41■■■□□ 2.94
PABPN1-201ENST00000216727 FER1L6Q2WGJ9 1857 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 MMP14P50281 582 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 USP11P51784 963 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 CIAPIN1Q6FI81 312 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 FBXO11Q86XK2 927 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 CTAGE1Q96RT6 745 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 ZBTB21Q9ULJ3 1066 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 USP17L15C9J2P7 530 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 USP17L13C9JLJ4 530 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 USP17L11C9JVI0 530 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 USP17L18D6R9N7 530 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 USP17L22D6RA61 530 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 USP17L17D6RBQ6 530 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 USP17L19D6RCP7 530 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 USP17L20D6RJB6 530 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 AMPD3Q01432 767 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 USP17L24Q0WX57 530 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 KMT5BQ4FZB7 885 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 USP17L6PQ6QN14 398 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 MTFR1LQ9H019 292 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 STK17AQ9UEE5 414 aa33.4■■■□□ 2.94
PABPN1-201ENST00000216727 MEIS2O14770 477 aa33.39■■■□□ 2.94
PABPN1-201ENST00000216727 TBX2Q13207 712 aaPredicted RBP33.39■■■□□ 2.94
PABPN1-201ENST00000216727 TRIM9Q9C026 710 aa33.39■■■□□ 2.94
PABPN1-201ENST00000216727 GDAQ9Y2T3 454 aa33.39■■■□□ 2.94
PABPN1-201ENST00000216727 BRCA1P38398 1863 aaKnown RBP33.39■■■□□ 2.94
PABPN1-201ENST00000216727 IKQ13123 557 aaPredicted RBP33.38■■■□□ 2.93
PABPN1-201ENST00000216727 SPECC1LQ69YQ0 1117 aa33.38■■■□□ 2.93
PABPN1-201ENST00000216727 ADSSL1Q8N142 457 aa33.38■■■□□ 2.93
PABPN1-201ENST00000216727 JDP2Q8WYK2 163 aa33.38■■■□□ 2.93
PABPN1-201ENST00000216727 GTPBP4Q9BZE4 634 aaKnown RBP33.38■■■□□ 2.93
PABPN1-201ENST00000216727 PRCPP42785 496 aa33.38■■■□□ 2.93
PABPN1-201ENST00000216727 GIMAP8Q8ND71 665 aaPredicted RBP33.38■■■□□ 2.93
PABPN1-201ENST00000216727 CCDC112Q8NEF3 446 aa33.38■■■□□ 2.93
PABPN1-201ENST00000216727 NELFBQ8WX92 580 aa33.38■■■□□ 2.93
PABPN1-201ENST00000216727 HAS1Q92839 578 aa33.38■■■□□ 2.93
PABPN1-201ENST00000216727 ANO3Q9BYT9 981 aa33.38■■■□□ 2.93
PABPN1-201ENST00000216727 TMEM39BQ9GZU3 492 aa33.38■■■□□ 2.93
PABPN1-201ENST00000216727 PGAP2Q9UHJ9 254 aa33.38■■■□□ 2.93
PABPN1-201ENST00000216727 GRB10Q13322 594 aa33.37■■■□□ 2.93
PABPN1-201ENST00000216727 MOXD1Q6UVY6 613 aa33.37■■■□□ 2.93
PABPN1-201ENST00000216727 GOPCQ9HD26 462 aa33.37■■■□□ 2.93
PABPN1-201ENST00000216727 CYP3A7-CYP3A51PA0A087WV96 503 aa33.36■■■□□ 2.93
PABPN1-201ENST00000216727 WNT10BO00744 389 aa33.36■■■□□ 2.93
PABPN1-201ENST00000216727 CYP3A7P24462 503 aa33.36■■■□□ 2.93
PABPN1-201ENST00000216727 ECE1P42892 770 aa33.36■■■□□ 2.93
PABPN1-201ENST00000216727 MAP3K10Q02779 954 aa33.36■■■□□ 2.93
PABPN1-201ENST00000216727 TPD52L1Q16890 204 aaPredicted RBP33.36■■■□□ 2.93
PABPN1-201ENST00000216727 TEX2Q8IWB9 1127 aa33.36■■■□□ 2.93
PABPN1-201ENST00000216727 CCDC47Q96A33 483 aaKnown RBP33.36■■■□□ 2.93
PABPN1-201ENST00000216727 MBOAT7Q96N66 472 aa33.36■■■□□ 2.93
PABPN1-201ENST00000216727 ADD3Q9UEY8 706 aaKnown RBP33.36■■■□□ 2.93
PABPN1-201ENST00000216727 ACER1Q8TDN7 264 aa33.35■■■□□ 2.93
PABPN1-201ENST00000216727 CRYGNQ8WXF5 182 aa33.35■■■□□ 2.93
PABPN1-201ENST00000216727 PNMA5Q96PV4 448 aa33.35■■■□□ 2.93
PABPN1-201ENST00000216727 TMX1Q9H3N1 280 aa33.35■■■□□ 2.93
PABPN1-201ENST00000216727 MYOZ2Q9NPC6 264 aa33.35■■■□□ 2.93
PABPN1-201ENST00000216727 PRR12Q9ULL5 1215 aa33.35■■■□□ 2.93
PABPN1-201ENST00000216727 STAT2P52630 851 aa33.35■■■□□ 2.93
PABPN1-201ENST00000216727 SPAG1Q07617 926 aa33.35■■■□□ 2.93
PABPN1-201ENST00000216727 TNIP1Q15025 636 aa33.35■■■□□ 2.93
PABPN1-201ENST00000216727 KRT79Q5XKE5 535 aa33.35■■■□□ 2.93
PABPN1-201ENST00000216727 POTEMA6NI47 508 aa33.34■■■□□ 2.93
PABPN1-201ENST00000216727 LRRC10BA6NIK2 292 aa33.34■■■□□ 2.93
PABPN1-201ENST00000216727 FOSP01100 380 aaPredicted RBP33.34■■■□□ 2.93
PABPN1-201ENST00000216727 TRAF1Q13077 416 aa33.34■■■□□ 2.93
PABPN1-201ENST00000216727 STIM1Q13586 685 aa33.34■■■□□ 2.93
PABPN1-201ENST00000216727 SPICE1Q8N0Z3 855 aa33.34■■■□□ 2.93
PABPN1-201ENST00000216727 CCAR2Q8N163 923 aaKnown RBP33.34■■■□□ 2.93
PABPN1-201ENST00000216727 BLOC1S4Q9NUP1 217 aa33.34■■■□□ 2.93
PABPN1-201ENST00000216727 SV2BQ7L1I2 683 aa33.33■■■□□ 2.93
PABPN1-201ENST00000216727 CDAN1Q8IWY9 1227 aa33.33■■■□□ 2.93
PABPN1-201ENST00000216727 LIMA1Q9UHB6 759 aaKnown RBP33.33■■■□□ 2.93
PABPN1-201ENST00000216727 CAP2P40123 477 aa33.33■■■□□ 2.93
PABPN1-201ENST00000216727 SNAP25P60880 206 aa33.33■■■□□ 2.93
PABPN1-201ENST00000216727 NBPF9Q3BBW0 867 aa33.33■■■□□ 2.93
PABPN1-201ENST00000216727 CDK5RAP3Q96JB5 506 aa33.33■■■□□ 2.93
PABPN1-201ENST00000216727 H7C1D1 291 aa33.32■■■□□ 2.92
PABPN1-201ENST00000216727 NFKBIEO00221 500 aa33.32■■■□□ 2.92
PABPN1-201ENST00000216727 FILIP1LQ4L180 1135 aa33.32■■■□□ 2.92
PABPN1-201ENST00000216727 SNX29Q8TEQ0 813 aa33.32■■■□□ 2.92
PABPN1-201ENST00000216727 C16orf45Q96MC5 204 aaPredicted RBP33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms