RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 SORCS2Q96PQ0 1159 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 FERD3LQ96RJ6 166 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 SPON2Q9BUD6 331 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 LNPKQ9C0E8 428 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 SMPD4Q9NXE4 827 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 ZNRF3Q9ULT6 936 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 ZNF451Q9Y4E5 1061 aa4.93□□□□□ -1.62
CDKN3-201ENST00000216414 ITGB3P05106 788 aa4.92□□□□□ -1.62
CDKN3-201ENST00000216414 GLI4P10075 376 aa4.92□□□□□ -1.62
CDKN3-201ENST00000216414 SARSP49591 514 aaKnown RBP4.92□□□□□ -1.62
CDKN3-201ENST00000216414 PPP2R5DQ14738 602 aa4.92□□□□□ -1.62
CDKN3-201ENST00000216414 ANKRD39Q53RE8 183 aa4.92□□□□□ -1.62
CDKN3-201ENST00000216414 FBXW10Q5XX13 1052 aa4.92□□□□□ -1.62
CDKN3-201ENST00000216414 NLGN2Q8NFZ4 835 aa4.92□□□□□ -1.62
CDKN3-201ENST00000216414 NOX5Q96PH1 765 aa4.92□□□□□ -1.62
CDKN3-201ENST00000216414 NTMQ9P121 344 aa4.92□□□□□ -1.62
CDKN3-201ENST00000216414 NUDT5Q9UKK9 219 aa4.92□□□□□ -1.62
CDKN3-201ENST00000216414 RWDD3Q9Y3V2 267 aa4.92□□□□□ -1.62
CDKN3-201ENST00000216414 IMPDH2P12268 514 aa4.91□□□□□ -1.62
CDKN3-201ENST00000216414 ERCC3P19447 782 aa4.91□□□□□ -1.62
CDKN3-201ENST00000216414 ZYXQ15942 572 aaKnown RBP4.91□□□□□ -1.62
CDKN3-201ENST00000216414 TTLL7Q6ZT98 887 aa4.91□□□□□ -1.62
CDKN3-201ENST00000216414 ZBTB8AQ96BR9 441 aa4.91□□□□□ -1.62
CDKN3-201ENST00000216414 TSPAN17Q96FV3 270 aa4.91□□□□□ -1.62
CDKN3-201ENST00000216414 LOXL4Q96JB6 756 aa4.91□□□□□ -1.62
CDKN3-201ENST00000216414 TM9SF2Q99805 663 aa4.91□□□□□ -1.62
CDKN3-201ENST00000216414 STXBP3O00186 592 aa4.9□□□□□ -1.63
CDKN3-201ENST00000216414 MATN3O15232 486 aa4.9□□□□□ -1.63
CDKN3-201ENST00000216414 SMAD4Q13485 552 aaKnown RBP4.9□□□□□ -1.63
CDKN3-201ENST00000216414 TCEAL1Q15170 157 aa4.9□□□□□ -1.63
CDKN3-201ENST00000216414 UNC5AQ6ZN44 842 aa4.9□□□□□ -1.63
CDKN3-201ENST00000216414 ZNF761Q86XN6 746 aaPredicted RBP4.9□□□□□ -1.63
CDKN3-201ENST00000216414 TAB3Q8N5C8 712 aaPredicted RBP4.9□□□□□ -1.63
CDKN3-201ENST00000216414 LZTR1Q8N653 840 aa4.9□□□□□ -1.63
CDKN3-201ENST00000216414 ADCY4Q8NFM4 1077 aa4.9□□□□□ -1.63
CDKN3-201ENST00000216414 RNF34Q969K3 372 aa4.9□□□□□ -1.63
CDKN3-201ENST00000216414 DDX11Q96FC9 970 aa4.9□□□□□ -1.63
CDKN3-201ENST00000216414 PEX11GQ96HA9 241 aa4.9□□□□□ -1.63
CDKN3-201ENST00000216414 SPATA6Q9NWH7 488 aaPredicted RBP4.9□□□□□ -1.63
CDKN3-201ENST00000216414 SMARCA5O60264 1052 aaPredicted RBP4.89□□□□□ -1.63
CDKN3-201ENST00000216414 GUCY2CP25092 1073 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 CACNB2Q08289 660 aaPredicted RBP4.89□□□□□ -1.63
CDKN3-201ENST00000216414 TRIM26Q12899 539 aaPredicted RBP4.89□□□□□ -1.63
CDKN3-201ENST00000216414 MRPL58Q14197 206 aaKnown RBP4.89□□□□□ -1.63
CDKN3-201ENST00000216414 CCDC27Q2M243 656 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 DPY19L1Q2PZI1 675 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 EEF1DP3Q658K8 133 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 RCSD1Q6JBY9 416 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 RUFY4Q6ZNE9 571 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 NETO2Q8NC67 525 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 ADAMTS17Q8TE56 1095 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 USP33Q8TEY7 942 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 BCL2L13Q9BXK5 485 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 BCL11AQ9H165 835 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 FBLN5Q9UBX5 448 aa4.89□□□□□ -1.63
CDKN3-201ENST00000216414 GDF5P43026 501 aa4.88□□□□□ -1.63
CDKN3-201ENST00000216414 SLC9A5Q14940 896 aa4.88□□□□□ -1.63
CDKN3-201ENST00000216414 CPZQ66K79 652 aa4.88□□□□□ -1.63
CDKN3-201ENST00000216414 CPNE8Q86YQ8 564 aa4.88□□□□□ -1.63
CDKN3-201ENST00000216414 GIPC2Q8TF65 315 aa4.88□□□□□ -1.63
CDKN3-201ENST00000216414 C8orf49Q96NF6 230 aa4.88□□□□□ -1.63
CDKN3-201ENST00000216414 RBM15Q96T37 977 aaKnown RBP eCLIP4.88□□□□□ -1.63
CDKN3-201ENST00000216414 MCMBPQ9BTE3 642 aa4.88□□□□□ -1.63
CDKN3-201ENST00000216414 MENTQ9BUN1 341 aa4.88□□□□□ -1.63
CDKN3-201ENST00000216414 GULP1Q9UBP9 304 aa4.88□□□□□ -1.63
CDKN3-201ENST00000216414 DIS3Q9Y2L1 958 aaKnown RBP4.88□□□□□ -1.63
CDKN3-201ENST00000216414 A0A087WZG4 1122 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 AURKAO14965 403 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 CBFA2T2O43439 604 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 VAMP4O75379 141 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 ZBTB7AO95365 584 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 CYP2C8P10632 490 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 SEPHS1P49903 392 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 ZNF326Q5BKZ1 582 aaKnown RBP4.87□□□□□ -1.63
CDKN3-201ENST00000216414 WWC2Q6AWC2 1192 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 ADAT2Q7Z6V5 191 aaKnown RBP4.87□□□□□ -1.63
CDKN3-201ENST00000216414 TMEM87AQ8NBN3 555 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 CHST13Q8NET6 341 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 CPA5Q8WXQ8 436 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 HAUS7Q99871 368 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 MRIQ9BWK5 157 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 WHRNQ9P202 907 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 ZNF214Q9UL59 606 aaPredicted RBP4.87□□□□□ -1.63
CDKN3-201ENST00000216414 PPT2Q9UMR5 302 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 SIT1Q9Y3P8 196 aa4.87□□□□□ -1.63
CDKN3-201ENST00000216414 PPP1R11O60927 126 aaPredicted RBP4.86□□□□□ -1.63
CDKN3-201ENST00000216414 PLATP00750 562 aa4.86□□□□□ -1.63
CDKN3-201ENST00000216414 PDIA4P13667 645 aaKnown RBP4.86□□□□□ -1.63
CDKN3-201ENST00000216414 ZNF20P17024 532 aa4.86□□□□□ -1.63
CDKN3-201ENST00000216414 RGL3Q3MIN7 710 aa4.86□□□□□ -1.63
CDKN3-201ENST00000216414 GNPTABQ3T906 1256 aa4.86□□□□□ -1.63
CDKN3-201ENST00000216414 TBC1D10BQ4KMP7 808 aaPredicted RBP4.86□□□□□ -1.63
CDKN3-201ENST00000216414 SAMD11Q96NU1 681 aa4.86□□□□□ -1.63
CDKN3-201ENST00000216414 GBP3Q9H0R5 595 aa4.86□□□□□ -1.63
CDKN3-201ENST00000216414 BACE2Q9Y5Z0 518 aa4.86□□□□□ -1.63
CDKN3-201ENST00000216414 ZNF536O15090 1300 aa4.86□□□□□ -1.63
CDKN3-201ENST00000216414 C2orf71A6NGG8 1288 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 C1QTNF3-AMACRE9PGA6 284 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 FUCA1P04066 466 aa4.85□□□□□ -1.63
CDKN3-201ENST00000216414 NTRK1P04629 796 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms