RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 MLANAQ16655 118 aa5.01□□□□□ -1.61
ATM-230ENST00000640388 NPM2Q86SE8 214 aaKnown RBP5.01□□□□□ -1.61
ATM-230ENST00000640388 CILP2Q8IUL8 1156 aa5.01□□□□□ -1.61
ATM-230ENST00000640388 KSR1Q8IVT5 923 aa5.01□□□□□ -1.61
ATM-230ENST00000640388 SIRT2Q8IXJ6 389 aa5.01□□□□□ -1.61
ATM-230ENST00000640388 ZNF513Q8N8E2 541 aaPredicted RBP5.01□□□□□ -1.61
ATM-230ENST00000640388 TMEM52Q8NDY8 209 aa5.01□□□□□ -1.61
ATM-230ENST00000640388 FAM84AQ96KN4 292 aa5.01□□□□□ -1.61
ATM-230ENST00000640388 C8orf37Q96NL8 207 aa5.01□□□□□ -1.61
ATM-230ENST00000640388 FAM53CQ9NYF3 392 aa5.01□□□□□ -1.61
ATM-230ENST00000640388 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.01□□□□□ -1.61
ATM-230ENST00000640388 GPR55Q9Y2T6 319 aaPredicted RBP5.01□□□□□ -1.61
ATM-230ENST00000640388 STXBP3O00186 592 aa5□□□□□ -1.61
ATM-230ENST00000640388 NOP56O00567 594 aaKnown RBP5□□□□□ -1.61
ATM-230ENST00000640388 KLF4O43474 513 aa5□□□□□ -1.61
ATM-230ENST00000640388 NRDCO43847 1150 aa5□□□□□ -1.61
ATM-230ENST00000640388 KCNH1O95259 989 aa5□□□□□ -1.61
ATM-230ENST00000640388 GJB6O95452 261 aa5□□□□□ -1.61
ATM-230ENST00000640388 AMPD2Q01433 879 aa5□□□□□ -1.61
ATM-230ENST00000640388 SNX17Q15036 470 aa5□□□□□ -1.61
ATM-230ENST00000640388 SV2CQ496J9 727 aa5□□□□□ -1.61
ATM-230ENST00000640388 MRM1Q6IN84 353 aaKnown RBP5□□□□□ -1.61
ATM-230ENST00000640388 PRR23BQ6ZRT6 265 aa5□□□□□ -1.61
ATM-230ENST00000640388 CELF2-AS1Q8N7Q2 184 aa5□□□□□ -1.61
ATM-230ENST00000640388 BVESQ8NE79 360 aa5□□□□□ -1.61
ATM-230ENST00000640388 SLC38A3Q99624 504 aa5□□□□□ -1.61
ATM-230ENST00000640388 MCMBPQ9BTE3 642 aa5□□□□□ -1.61
ATM-230ENST00000640388 LGR4Q9BXB1 951 aa5□□□□□ -1.61
ATM-230ENST00000640388 KRTAP17-1Q9BYP8 105 aa5□□□□□ -1.61
ATM-230ENST00000640388 CWC22Q9HCG8 908 aaKnown RBP5□□□□□ -1.61
ATM-230ENST00000640388 CLASP1Q7Z460 1538 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 WTIPA6NIX2 430 aaPredicted RBP4.99□□□□□ -1.61
ATM-230ENST00000640388 AURKAO14965 403 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 FGF10O15520 208 aaPredicted RBP4.99□□□□□ -1.61
ATM-230ENST00000640388 SUSD5O60279 629 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 EFEMP2O95967 443 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 GTF2F1P35269 517 aaKnown RBP eCLIP4.99□□□□□ -1.61
ATM-230ENST00000640388 GRB10Q13322 594 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 KIR3DS1Q14943 382 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 HSF5Q4G112 596 aaPredicted RBP4.99□□□□□ -1.61
ATM-230ENST00000640388 POMZP3Q6PJE2 187 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 NLRX1Q86UT6 975 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 JAMLQ86YT9 394 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 CRACR2BQ8N4Y2 399 aaPredicted RBP4.99□□□□□ -1.61
ATM-230ENST00000640388 SHISA4Q96DD7 197 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 PTCHD1Q96NR3 888 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 DIRC2Q96SL1 478 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 PLCD4Q9BRC7 762 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 TRIM55Q9BYV6 548 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 LRP2BPQ9P2M1 347 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 YBX2Q9Y2T7 364 aaKnown RBP4.99□□□□□ -1.61
ATM-230ENST00000640388 EMC9Q9Y3B6 208 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 TAF6LQ9Y6J9 622 aa4.99□□□□□ -1.61
ATM-230ENST00000640388 HMGXB3Q12766 1538 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 ZNF608Q9ULD9 1512 aaPredicted RBP4.98□□□□□ -1.61
ATM-230ENST00000640388 A0A1W2PQ27 194 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 A0A1W2PQ45 241 aaPredicted RBP4.98□□□□□ -1.61
ATM-230ENST00000640388 A0A1W2PQ64 194 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 A0A1W2PQC6 194 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 A0A1W2PQD8 194 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 A0A1W2PQY0 241 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 C2orf71A6NGG8 1288 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 TBC1D8O95759 1140 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 PDE6BP35913 854 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 CEBPAP49715 358 aaPredicted RBP4.98□□□□□ -1.61
ATM-230ENST00000640388 SEPHS1P49903 392 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 DDR2Q16832 855 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 HLA-DQA1Q5Y7H0 255 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 GALNT18Q6P9A2 607 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 CYP2R1Q6VVX0 501 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 EEPD1Q7L9B9 569 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 SLCO6A1Q86UG4 719 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 CKAP2LQ8IYA6 745 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 JMJD8Q96S16 334 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 SLC6A17Q9H1V8 727 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 NSUN3Q9H649 340 aaKnown RBP4.98□□□□□ -1.61
ATM-230ENST00000640388 KCNK12Q9HB15 430 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 BACE2Q9Y5Z0 518 aa4.98□□□□□ -1.61
ATM-230ENST00000640388 TSPAN15O95858 294 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 ITGAVP06756 1048 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 PRKCAP17252 672 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 SDHBP21912 280 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 RAB33AQ14088 237 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 ADGRF1Q5T601 910 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 EEF1DP3Q658K8 133 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 GTF2IRD2BQ6EKJ0 949 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 RCSD1Q6JBY9 416 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 GTF2IRD2Q86UP8 949 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 TRIM59Q8IWR1 403 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 NUP43Q8NFH3 380 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 INTS4Q96HW7 963 aaKnown RBP4.97□□□□□ -1.61
ATM-230ENST00000640388 PPP1R16BQ96T49 567 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 DCP1AQ9NPI6 582 aaPredicted RBP4.97□□□□□ -1.61
ATM-230ENST00000640388 IMPACTQ9P2X3 320 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 SMARCA4P51532 1647 aa4.97□□□□□ -1.61
ATM-230ENST00000640388 U2SURPO15042 1029 aaKnown RBP4.96□□□□□ -1.62
ATM-230ENST00000640388 TBX1O43435 398 aa4.96□□□□□ -1.62
ATM-230ENST00000640388 PNLIPP16233 465 aa4.96□□□□□ -1.62
ATM-230ENST00000640388 CYP4F8P98187 520 aa4.96□□□□□ -1.62
ATM-230ENST00000640388 SCRN1Q12765 414 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms