RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 PDLIM2Q96JY6 352 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 SPZ1Q9BXG8 430 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 KIAA1683Q9H0B3 1180 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 A0A1B0GVL5 298 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 TMEM232C9JQI7 657 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 FAM160A1Q05DH4 1040 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 KRT40Q6A162 431 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 ZNF280CQ8ND82 737 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 WDR18Q9BV38 432 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 R3HDMLQ9H3Y0 253 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 M0R2N6 131 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 STXBP3O00186 592 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 EDIL3O43854 480 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 CAVIN2O95810 425 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 COA7Q96BR5 231 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 PGBD1Q96JS3 809 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 PHF20Q9BVI0 1012 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 BTBD18B2RXH4 712 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 ASPRV1Q53RT3 343 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 TNFRSF25Q93038 417 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 OTUD5Q96G74 571 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 RCOR1Q9UKL0 485 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 PASKQ96RG2 1323 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 LCTP09848 1927 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 BIN1O00499 593 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 DEXIO95424 95 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 BMP3P12645 472 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 SCG2P13521 617 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 PPP2R5BQ15173 497 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 CCDC96Q2M329 555 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 CBX8Q9HC52 389 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 HOOK1Q9UJC3 728 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 PRR12Q9ULL5 1215 aa9.37□□□□□ -0.91
CACNA1A-232ENST00000636966 ZNF536O15090 1300 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 PPP1R12BO60237 982 aaPredicted RBP9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 CELF2O95319 508 aaKnown RBP9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 KIF5BP33176 963 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 KIF23Q02241 960 aaPredicted RBP9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 MYSM1Q5VVJ2 828 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 BTNL9Q6UXG8 535 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 DCAF4Q8WV16 495 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 ARHGEF10LQ9HCE6 1279 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 BRMS1Q9HCU9 246 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 MMP1P03956 469 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 ANO1Q5XXA6 986 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 RASGRP4Q8TDF6 673 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 OPTNQ96CV9 577 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 MNX1P50219 401 aaPredicted RBP9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 TOB1P50616 345 aaPredicted RBP9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 MKRN3Q13064 507 aaKnown RBP9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 QRICH1Q2TAL8 776 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 PICK1Q9NRD5 415 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 BARHL2Q9NY43 387 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 MRVI1Q9Y6F6 885 aa9.36□□□□□ -0.91
CACNA1A-232ENST00000636966 OFD1O75665 1012 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 SMC2O95347 1197 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 GPATCH4Q5T3I0 446 aaKnown RBP9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 FILIP1Q7Z7B0 1213 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 ANKRD13AQ8IZ07 590 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 SYNPO2Q9UMS6 1093 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 PCDHA7Q9UN72 937 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 LAMA2P24043 3122 aaKnown RBP9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 COL11A1P12107 1806 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 SPDYE5A6NIY4 337 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 TPM2P07951 284 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 U2AF2P26368 475 aaKnown RBP eCLIP9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 CHADLQ6NUI6 762 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 ERCC4Q92889 916 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 KIFC2Q96AC6 838 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 MS4A4AQ96JQ5 239 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 RPAP3Q9H6T3 665 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 CLIC4Q9Y696 253 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 SYKP43405 635 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 TTLL12Q14166 644 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 ISM2Q6H9L7 571 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 HEATR3Q7Z4Q2 680 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 TBC1D5Q92609 795 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 FEZ1Q99689 392 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 GPBP1L1Q9HC44 474 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 GOPCQ9HD26 462 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 FAM13BQ9NYF5 915 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 KCNG1Q9UIX4 513 aa9.35□□□□□ -0.91
CACNA1A-232ENST00000636966 YEATS4O95619 227 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 IREB2P48200 963 aaKnown RBP9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 STAT2P52630 851 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 CDC37Q16543 378 aaPredicted RBP9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 ADALQ6DHV7 355 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 RTEL1Q9NZ71 1219 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 A0A0G2JLL6 359 aaPredicted RBP9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 ZBTB5O15062 677 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 SMARCA1P28370 1054 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 SH3D19Q5HYK7 790 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 GPAT2Q6NUI2 795 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 CCDC186Q7Z3E2 898 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 PRRT2Q7Z6L0 340 aaPredicted RBP9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 DIS3L2Q8IYB7 885 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms