RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 PIF1Q9H611 641 aa6.23□□□□□ -1.41
CDKL5-207ENST00000624700 APEX2Q9UBZ4 518 aa6.23□□□□□ -1.41
CDKL5-207ENST00000624700 TCFL5Q9UL49 500 aa6.23□□□□□ -1.41
CDKL5-207ENST00000624700 TRBV23OR9-2A0A075B6M9 112 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 A0A1W2PQU0 124 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 NFIBO00712 420 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 ZNF205O95201 554 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 KCNH1O95259 989 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 ESR1P03372 595 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 SYPP08247 313 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 C1QTNF9P0C862 333 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 FGFR1P11362 822 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 EGR3Q06889 387 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 C2orf27AQ580R0 203 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 GTF2IRD2BQ6EKJ0 949 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 LCNL1Q6ZST4 164 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 SPATC1Q76KD6 591 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 GTF2IRD2Q86UP8 949 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 ZNF227Q86WZ6 799 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 ALPK1Q96QP1 1244 aa6.22□□□□□ -1.41
CDKL5-207ENST00000624700 AARSD1Q9BTE6 412 aaKnown RBP6.22□□□□□ -1.41
CDKL5-207ENST00000624700 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 MEIS1O00470 390 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 KRT1P04264 644 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 ZSCAN22P10073 491 aaPredicted RBP6.21□□□□□ -1.42
CDKL5-207ENST00000624700 PPP2R2AP63151 447 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 DUSP4Q13115 394 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 EEF1DP3Q658K8 133 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 IQCEQ6IPM2 695 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 RCSD1Q6JBY9 416 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 DIRC2Q96SL1 478 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 CDC6Q99741 560 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 NKX2-4Q9H2Z4 354 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 NSUN3Q9H649 340 aaKnown RBP6.21□□□□□ -1.42
CDKL5-207ENST00000624700 PFDN2Q9UHV9 154 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 PCDHA11Q9Y5I1 949 aa6.21□□□□□ -1.42
CDKL5-207ENST00000624700 DNAJC25-GNG10A0A024R161 153 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 C2orf71A6NGG8 1288 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 H0Y8X5 98 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 AURKAO14965 403 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 TBC1D8O95759 1140 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 CAPNS1P04632 268 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 SCG5P05408 212 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 RAC2P15153 192 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 CTSKP43235 329 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 SEPHS1P49903 392 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 NSMFQ6X4W1 530 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 SPPL2CQ8IUH8 684 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 LILRB2Q8N423 598 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 KCTD13Q8WZ19 329 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 FCRL3Q96P31 734 aaPredicted RBP6.2□□□□□ -1.42
CDKL5-207ENST00000624700 SLC12A9Q9BXP2 914 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 FOXP3Q9BZS1 431 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 SLAMF8Q9P0V8 285 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 TNFRSF10DQ9UBN6 386 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 ZNF281Q9Y2X9 895 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 BACE2Q9Y5Z0 518 aa6.2□□□□□ -1.42
CDKL5-207ENST00000624700 VAMP4O75379 141 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 APPP05067 770 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 CD3EP07766 207 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 GSTM1P09488 218 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 TMEM253P0C7T8 217 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 RPL10P27635 214 aaKnown RBP6.19□□□□□ -1.42
CDKL5-207ENST00000624700 TEKQ02763 1124 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 TAF7LQ5H9L4 462 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 LILRA6Q6PI73 481 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 CRTC3Q6UUV7 619 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 CYP2R1Q6VVX0 501 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 HOMER1Q86YM7 354 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 ABHD4Q8TB40 342 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 TMX1Q9H3N1 280 aa6.19□□□□□ -1.42
CDKL5-207ENST00000624700 DCP1AQ9NPI6 582 aaPredicted RBP6.19□□□□□ -1.42
CDKL5-207ENST00000624700 CADPSQ9ULU8 1353 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 WASH4PA8MWX3 477 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 ADCY3O60266 1144 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 DIAPH1O60610 1272 aaKnown RBP6.18□□□□□ -1.42
CDKL5-207ENST00000624700 FAM153BP0C7A2 387 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 PABPC1P11940 636 aaKnown RBP6.18□□□□□ -1.42
CDKL5-207ENST00000624700 KIR2DL1P43626 348 aaPredicted RBP6.18□□□□□ -1.42
CDKL5-207ENST00000624700 KIR2DL2P43627 348 aaPredicted RBP6.18□□□□□ -1.42
CDKL5-207ENST00000624700 KCNJ6P48051 423 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 CHRNEQ04844 493 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 MAP4K2Q12851 820 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 HLA-DQA1Q5Y7H0 255 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 E4F1Q66K89 784 aaPredicted RBP6.18□□□□□ -1.42
CDKL5-207ENST00000624700 GIMAP6Q6P9H5 292 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 WAPLQ7Z5K2 1190 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 OXR1Q8N573 874 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 SH3TC2Q8TF17 1288 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 APPBP2Q92624 585 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 COPS5Q92905 334 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 RNPC3Q96LT9 517 aaKnown RBP6.18□□□□□ -1.42
CDKL5-207ENST00000624700 DHRS4Q9BTZ2 278 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 CDADC1Q9BWV3 514 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 EPB41L4BQ9H329 900 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 ARHGEF4Q9NR80 690 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 MINPP1Q9UNW1 487 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 GPR55Q9Y2T6 319 aaPredicted RBP6.18□□□□□ -1.42
CDKL5-207ENST00000624700 TBX22Q9Y458 520 aa6.18□□□□□ -1.42
CDKL5-207ENST00000624700 TRBV23-1A0A0A0MS06 115 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms