RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 NCAPH2Q6IBW4 605 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 WDR59Q6PJI9 974 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 STAG2Q8N3U4 1231 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 NGLY1Q96IV0 654 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 TCP11L1Q9NUJ3 509 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 EXOC1Q9NV70 894 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 TFCP2L1Q9NZI6 479 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 VPS18Q9P253 973 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 MAD2L2Q9UI95 211 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 PP2D1A8MPX8 630 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 CPP00450 1065 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 HERVK_113P62684 666 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 INF2Q27J81 1249 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 HSP90B2PQ58FF3 399 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 TYW1BQ6NUM6 668 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 FAM114A1Q8IWE2 563 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 SUGP1Q8IWZ8 645 aaKnown RBP16.39■□□□□ 0.22
CTCFL-219ENST00000608720 CCDC170Q8IYT3 715 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 PPM1EQ8WY54 764 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 ZFP91Q96JP5 570 aaPredicted RBP16.39■□□□□ 0.22
CTCFL-219ENST00000608720 RPGRIP1Q96KN7 1286 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 AK8Q96MA6 479 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 LZTS2Q9BRK4 669 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 TUBGCP2Q9BSJ2 902 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 BARHL2Q9NY43 387 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 TRIM10Q9UDY6 481 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 SAR1BQ9Y6B6 198 aa16.39■□□□□ 0.22
CTCFL-219ENST00000608720 SPATA31A1Q5TZJ5 1347 aa16.39■□□□□ 0.21
CTCFL-219ENST00000608720 KRT86O43790 486 aa16.39■□□□□ 0.21
CTCFL-219ENST00000608720 USP14P54578 494 aa16.39■□□□□ 0.21
CTCFL-219ENST00000608720 KIAA1328Q86T90 577 aa16.39■□□□□ 0.21
CTCFL-219ENST00000608720 DZIP1Q86YF9 867 aaKnown RBP16.39■□□□□ 0.21
CTCFL-219ENST00000608720 CSGALNACT2Q8N6G5 542 aa16.39■□□□□ 0.21
CTCFL-219ENST00000608720 SUGCTQ9HAC7 445 aa16.39■□□□□ 0.21
CTCFL-219ENST00000608720 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
CTCFL-219ENST00000608720 STXBP3O00186 592 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 CCNE1P24864 410 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 CKAP4Q07065 602 aaKnown RBP16.38■□□□□ 0.21
CTCFL-219ENST00000608720 FAM71BQ8TC56 605 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 DUSP9Q99956 384 aaKnown RBP16.38■□□□□ 0.21
CTCFL-219ENST00000608720 B4DLN1 442 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 IPO7O95373 1038 aaKnown RBP16.38■□□□□ 0.21
CTCFL-219ENST00000608720 TRIM21P19474 475 aaKnown RBP16.38■□□□□ 0.21
CTCFL-219ENST00000608720 ZBED6P86452 979 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 TBC1D8BQ0IIM8 1120 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 BICDL1Q6ZP65 573 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 HEATR3Q7Z4Q2 680 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 AMOTL1Q8IY63 956 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 P2RX5Q93086 422 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 JAKMIP2Q96AA8 810 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 TTYH3Q9C0H2 523 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 NYXQ9GZU5 481 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 VIPAS39Q9H9C1 493 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 MED4Q9NPJ6 270 aa16.38■□□□□ 0.21
CTCFL-219ENST00000608720 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 EIF3CLB5ME19 914 aaKnown RBP16.37■□□□□ 0.21
CTCFL-219ENST00000608720 CORO7P57737 925 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 MAP9Q49MG5 647 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 SWT1Q5T5J6 900 aaKnown RBP16.37■□□□□ 0.21
CTCFL-219ENST00000608720 CABP7Q86V35 215 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 IQCDQ96DY2 449 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 PLIN2Q99541 437 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 EIF3CQ99613 913 aaKnown RBP16.37■□□□□ 0.21
CTCFL-219ENST00000608720 A0A1B0GUL6 1792 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 TARSL2A2RTX5 802 aaKnown RBP16.37■□□□□ 0.21
CTCFL-219ENST00000608720 ENC1O14682 589 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 ATP1A1P05023 1023 aaKnown RBP16.37■□□□□ 0.21
CTCFL-219ENST00000608720 TSPY3P0CV98 308 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 TSPY8P0CW00 308 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 CDK17Q00537 523 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 KRT25Q7Z3Z0 450 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 ZNF444Q8N0Y2 327 aaPredicted RBP16.37■□□□□ 0.21
CTCFL-219ENST00000608720 C7orf25Q9BPX7 421 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 NHEJ1Q9H9Q4 299 aaPredicted RBP16.37■□□□□ 0.21
CTCFL-219ENST00000608720 HDAC6Q9UBN7 1215 aa16.37■□□□□ 0.21
CTCFL-219ENST00000608720 PALM3A6NDB9 673 aaPredicted RBP16.36■□□□□ 0.21
CTCFL-219ENST00000608720 CYTH3O43739 400 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 N4BP1O75113 896 aaKnown RBP16.36■□□□□ 0.21
CTCFL-219ENST00000608720 OR52Z1P0C646 297 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 AMPD3Q01432 767 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 PDE4DQ08499 809 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 SLC35G1Q2M3R5 365 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 FIGNQ5HY92 759 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 TBC1D9BQ66K14 1250 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 CCDC102AQ96A19 550 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 DYNLL2Q96FJ2 89 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 MMS19Q96T76 1030 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 TRIM9Q9C026 710 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 FAN1Q9Y2M0 1017 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 ROBO3Q96MS0 1386 aa16.36■□□□□ 0.21
CTCFL-219ENST00000608720 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
CTCFL-219ENST00000608720 A0A1W2PQJ5 194 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 ANO9A1A5B4 782 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 USP17L3A6NCW0 530 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 USP17L4A6NCW7 530 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 RASSF10A6NK89 507 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 PLCG1P19174 1290 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 COBLL1Q53SF7 1204 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 ANKRD40Q6AI12 368 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms