RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 MAATS1Q7Z4T9 603 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 FAM228AQ86W67 206 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 PARP9Q8IXQ6 854 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 CYFIP2Q96F07 1278 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 TSGA10Q9BZW7 698 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 EXOC1Q9NV70 894 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 NLRP2Q9NX02 1062 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 GOLGA6L7A0A1B0GV03 622 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 HEXIM1O94992 359 aaKnown RBP13.83□□□□□ -0.2
CDCA3-212ENST00000604599 SRGNP10124 158 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 TCP1P17987 556 aaKnown RBP13.83□□□□□ -0.2
CDCA3-212ENST00000604599 CLNS1AP54105 237 aaKnown RBP13.83□□□□□ -0.2
CDCA3-212ENST00000604599 ZBED6P86452 979 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 LRCH2Q5VUJ6 765 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 ADSSL1Q8N142 457 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 PIK3R5Q8WYR1 880 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 TUBGCP2Q9BSJ2 902 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 ARMT1Q9H993 441 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 RMND1Q9NWS8 449 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 XBP1P17861 261 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 EEF1GP26641 437 aaKnown RBP13.82□□□□□ -0.2
CDCA3-212ENST00000604599 UBE3CQ15386 1083 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 FUKQ8N0W3 1084 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 ATP6V1G3Q96LB4 118 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 KRT23Q9C075 422 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 CNNM2Q9H8M5 875 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 ATRNO75882 1429 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 OPLAHO14841 1288 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 PRKAB2O43741 272 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 MCM7P33993 719 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 TRADDQ15628 312 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 C6orf89Q6UWU4 347 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 ANKLE2Q86XL3 938 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 IFT20Q8IY31 132 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 TEX11Q8IYF3 940 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 PHF20Q9BVI0 1012 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 OSBPL7Q9BZF2 842 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 TPX2Q9ULW0 747 aaKnown RBP13.82□□□□□ -0.2
CDCA3-212ENST00000604599 PCDHA13Q9Y5I0 950 aa13.82□□□□□ -0.2
CDCA3-212ENST00000604599 MYH2Q9UKX2 1941 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 FER1L4A9Z1Z3 1794 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 LRP6O75581 1613 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 DNM1LO00429 736 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 RPSAP08865 295 aaKnown RBP13.81□□□□□ -0.2
CDCA3-212ENST00000604599 ATP2C1P98194 919 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-212ENST00000604599 PKN1Q16512 942 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 IL17AQ16552 155 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 ALS2CR12Q96Q35 445 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 ZNF330Q9Y3S2 320 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-212ENST00000604599 NID2Q14112 1375 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 ABCC12Q96J65 1359 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 KIF1AQ12756 1690 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 BMP15O95972 392 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 EZRP15311 586 aaKnown RBP13.81□□□□□ -0.2
CDCA3-212ENST00000604599 PAK2Q13177 524 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 ITGB3BPQ13352 177 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-212ENST00000604599 C2CD5Q86YS7 1000 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 KCNG1Q9UIX4 513 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 SALL4Q9UJQ4 1053 aa13.81□□□□□ -0.2
CDCA3-212ENST00000604599 V9GY48 417 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-212ENST00000604599 PATL2C9JE40 543 aaKnown RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 NKRFO15226 690 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 BUB1O43683 1085 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 TNFRSF8P28908 595 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 STAT6P42226 847 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 QPCTQ16769 361 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 CSGALNACT2Q8N6G5 542 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 RASSF8Q8NHQ8 419 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 FAM89AQ96GI7 184 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 SGSM3Q96HU1 749 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 PLIN2Q99541 437 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 RNF26Q9BY78 433 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 ARHGAP20Q9P2F6 1191 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 PHRF1Q9P1Y6 1649 aaKnown RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 TCRBV5S4A2TA0A5A2 114 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 PPP1R12BO60237 982 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 TATP17735 454 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 PHKA1P46020 1223 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 KIF11P52732 1056 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 MRPL12P52815 198 aaKnown RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 IFIT5Q13325 482 aaKnown RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 NAIF1Q69YI7 327 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 DHX37Q8IY37 1157 aaKnown RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 THAP9Q9H5L6 903 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 PLAAQ9Y263 795 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 SLC4A4Q9Y6R1 1079 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 SPATA31A3Q5VYP0 1347 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 RGPD5Q99666 1765 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 PSMA7O14818 248 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 AKR1B10O60218 316 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 SKAP2O75563 359 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 PLEKHA8P1O95397 391 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 PRLRP16471 622 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 MTIF2P46199 727 aaKnown RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 RNASE9P60153 205 aaKnown RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 ZC3H6P61129 1189 aaKnown RBP13.8□□□□□ -0.2
CDCA3-212ENST00000604599 NAA25Q14CX7 972 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 PIK3AP1Q6ZUJ8 805 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
CDCA3-212ENST00000604599 MAGEB6Q8N7X4 407 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms