RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 KIF3CO14782 793 aa25.82■■□□□ 1.72
IRF3-228ENST00000601291 ADAMTS3O15072 1205 aa25.82■■□□□ 1.72
IRF3-228ENST00000601291 SMC1BQ8NDV3 1235 aa25.82■■□□□ 1.72
IRF3-228ENST00000601291 BIN2Q9UBW5 565 aaPredicted RBP25.82■■□□□ 1.72
IRF3-228ENST00000601291 AGTPBP1Q9UPW5 1226 aa25.82■■□□□ 1.72
IRF3-228ENST00000601291 CLIC4Q9Y696 253 aa25.82■■□□□ 1.72
IRF3-228ENST00000601291 PARP14Q460N5 1801 aa25.82■■□□□ 1.72
IRF3-228ENST00000601291 FAM205CA6NFA0 338 aa25.82■■□□□ 1.72
IRF3-228ENST00000601291 HOXA7P31268 230 aaPredicted RBP25.82■■□□□ 1.72
IRF3-228ENST00000601291 GJA5P36382 358 aa25.82■■□□□ 1.72
IRF3-228ENST00000601291 PABPC4Q13310 644 aaKnown RBP eCLIP25.82■■□□□ 1.726e-8■■■■□ 22.6
IRF3-228ENST00000601291 STK38Q15208 465 aa25.82■■□□□ 1.72
IRF3-228ENST00000601291 NONOQ15233 471 aaKnown RBP eCLIP25.82■■□□□ 1.72
IRF3-228ENST00000601291 MCTP2Q6DN12 878 aa25.82■■□□□ 1.72
IRF3-228ENST00000601291 RCOR1Q9UKL0 485 aa25.82■■□□□ 1.72
IRF3-228ENST00000601291 TOB1P50616 345 aaPredicted RBP25.81■■□□□ 1.72
IRF3-228ENST00000601291 HUNKP57058 714 aa25.81■■□□□ 1.72
IRF3-228ENST00000601291 SF3A1Q15459 793 aaKnown RBP25.81■■□□□ 1.72
IRF3-228ENST00000601291 KCNG4Q8TDN1 519 aa25.81■■□□□ 1.72
IRF3-228ENST00000601291 ADAMTS5Q9UNA0 930 aa25.81■■□□□ 1.72
IRF3-228ENST00000601291 CEP131Q9UPN4 1083 aa25.81■■□□□ 1.72
IRF3-228ENST00000601291 ZNF536O15090 1300 aa25.81■■□□□ 1.72
IRF3-228ENST00000601291 TCHHQ07283 1943 aa25.81■■□□□ 1.72
IRF3-228ENST00000601291 PASKQ96RG2 1323 aa25.8■■□□□ 1.72
IRF3-228ENST00000601291 OAZ1P54368 228 aa25.8■■□□□ 1.72
IRF3-228ENST00000601291 IRX3P78415 501 aaPredicted RBP25.8■■□□□ 1.72
IRF3-228ENST00000601291 NOM1Q5C9Z4 860 aaKnown RBP25.8■■□□□ 1.72
IRF3-228ENST00000601291 JAKMIP3Q5VZ66 844 aa25.8■■□□□ 1.72
IRF3-228ENST00000601291 CPXCR1Q8N123 301 aa25.8■■□□□ 1.72
IRF3-228ENST00000601291 LINC00301Q8NCQ3 95 aa25.8■■□□□ 1.72
IRF3-228ENST00000601291 RAVER2Q9HCJ3 691 aaKnown RBP25.8■■□□□ 1.72
IRF3-228ENST00000601291 SPDYE16A6NNV3 312 aaPredicted RBP25.79■■□□□ 1.72
IRF3-228ENST00000601291 ZBTB48P10074 688 aaPredicted RBP25.79■■□□□ 1.72
IRF3-228ENST00000601291 ATP2B1P20020 1258 aa25.79■■□□□ 1.72
IRF3-228ENST00000601291 CLK2P49760 499 aaKnown RBP25.79■■□□□ 1.72
IRF3-228ENST00000601291 GTF2A2P52657 109 aa25.79■■□□□ 1.72
IRF3-228ENST00000601291 UBE2SQ16763 222 aa25.79■■□□□ 1.72
IRF3-228ENST00000601291 SKOR2Q2VWA4 1001 aaPredicted RBP25.79■■□□□ 1.72
IRF3-228ENST00000601291 AGBL1Q96MI9 1066 aa25.79■■□□□ 1.72
IRF3-228ENST00000601291 CETPP11597 493 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 UBE2HP62256 183 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 AP3B2Q13367 1082 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 TTC38Q5R3I4 469 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 TMEM260Q9NX78 707 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 GOLGA6L4A6NEF3 574 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 SPTLC2O15270 562 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 BMP15O95972 392 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 TAL1P17542 331 aaPredicted RBP25.78■■□□□ 1.72
IRF3-228ENST00000601291 MOGSQ13724 837 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 SLC39A14Q15043 492 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 JMYQ8N9B5 988 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 PCDHB6Q9Y5E3 794 aa25.78■■□□□ 1.72
IRF3-228ENST00000601291 RLFQ13129 1914 aa25.77■■□□□ 1.72
IRF3-228ENST00000601291 PIK3CDO00329 1044 aa25.77■■□□□ 1.72
IRF3-228ENST00000601291 OSBPP22059 807 aa25.77■■□□□ 1.72
IRF3-228ENST00000601291 INF2Q27J81 1249 aa25.77■■□□□ 1.72
IRF3-228ENST00000601291 SPRYD7Q5W111 196 aa25.77■■□□□ 1.72
IRF3-228ENST00000601291 USP17L6PQ6QN14 398 aa25.77■■□□□ 1.72
IRF3-228ENST00000601291 MB21D1Q8N884 522 aa25.77■■□□□ 1.72
IRF3-228ENST00000601291 REPS2Q8NFH8 660 aa25.77■■□□□ 1.72
IRF3-228ENST00000601291 MEIS2O14770 477 aa25.76■■□□□ 1.71
IRF3-228ENST00000601291 ATP2A1O14983 1001 aa25.76■■□□□ 1.71
IRF3-228ENST00000601291 MBD3O95983 291 aa25.76■■□□□ 1.71
IRF3-228ENST00000601291 ALAS1P13196 640 aa25.76■■□□□ 1.71
IRF3-228ENST00000601291 ME1P48163 572 aa25.76■■□□□ 1.71
IRF3-228ENST00000601291 NEK8Q86SG6 692 aa25.76■■□□□ 1.71
IRF3-228ENST00000601291 TBCKQ8TEA7 893 aa25.76■■□□□ 1.71
IRF3-228ENST00000601291 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.76■■□□□ 1.71
IRF3-228ENST00000601291 DDX49Q9Y6V7 483 aaKnown RBP25.76■■□□□ 1.71
IRF3-228ENST00000601291 GCOM1H8Y6P7 765 aaPredicted RBP25.75■■□□□ 1.71
IRF3-228ENST00000601291 OPLAHO14841 1288 aa25.75■■□□□ 1.71
IRF3-228ENST00000601291 FOSP01100 380 aaPredicted RBP25.75■■□□□ 1.71
IRF3-228ENST00000601291 POLR2MP0CAP2 368 aa25.75■■□□□ 1.71
IRF3-228ENST00000601291 PTPAQ15257 358 aa25.75■■□□□ 1.71
IRF3-228ENST00000601291 MCF2L2Q86YR7 1114 aa25.75■■□□□ 1.71
IRF3-228ENST00000601291 ASCC2Q9H1I8 757 aaPredicted RBP25.75■■□□□ 1.71
IRF3-228ENST00000601291 SPDYE3A6NKU9 549 aa25.74■■□□□ 1.71
IRF3-228ENST00000601291 TRAK2O60296 914 aa25.74■■□□□ 1.71
IRF3-228ENST00000601291 PPP6R2O75170 966 aa25.74■■□□□ 1.71
IRF3-228ENST00000601291 GADD45BO75293 160 aaPredicted RBP25.74■■□□□ 1.71
IRF3-228ENST00000601291 TOMM70O94826 608 aa25.74■■□□□ 1.71
IRF3-228ENST00000601291 CFBP00751 764 aa25.74■■□□□ 1.71
IRF3-228ENST00000601291 TEX13BQ9BXU2 312 aa25.74■■□□□ 1.71
IRF3-228ENST00000601291 PNMA3Q9UL41 463 aa25.74■■□□□ 1.71
IRF3-228ENST00000601291 CCL15-CCL14A0A0B4J2E2 113 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 MKRN3Q13064 507 aaKnown RBP25.73■■□□□ 1.71
IRF3-228ENST00000601291 TMEM132BQ14DG7 1078 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 CCL15Q16663 113 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 SNRNP48Q6IEG0 339 aaKnown RBP25.73■■□□□ 1.71
IRF3-228ENST00000601291 GPAT2Q6NUI2 795 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 LBX2Q6XYB7 198 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 SAPCD2Q86UD0 394 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 MS4A4AQ96JQ5 239 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 PGBD1Q96JS3 809 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 ANO3Q9BYT9 981 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 ZNF214Q9UL59 606 aaPredicted RBP25.73■■□□□ 1.71
IRF3-228ENST00000601291 A0A0G2JMZ2 1700 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 ZNF157P51786 506 aaPredicted RBP25.73■■□□□ 1.71
IRF3-228ENST00000601291 ZNF174Q15697 407 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 TKFCQ3LXA3 575 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms