RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SPDYE5A6NIY4 337 aa23.73■■□□□ 1.39
PNKP-203ENST00000593946 TRAF5O00463 557 aa23.73■■□□□ 1.39
PNKP-203ENST00000593946 OPLAHO14841 1288 aa23.73■■□□□ 1.39
PNKP-203ENST00000593946 PPATQ06203 517 aa23.73■■□□□ 1.39
PNKP-203ENST00000593946 SAMD1Q6SPF0 538 aaPredicted RBP23.73■■□□□ 1.39
PNKP-203ENST00000593946 CCAR1Q8IX12 1150 aaKnown RBP23.73■■□□□ 1.39
PNKP-203ENST00000593946 KRI1Q8N9T8 703 aaKnown RBP23.73■■□□□ 1.39
PNKP-203ENST00000593946 TMOD4Q9NZQ9 345 aa23.73■■□□□ 1.39
PNKP-203ENST00000593946 FBXO2Q9UK22 296 aaPredicted RBP23.73■■□□□ 1.39
PNKP-203ENST00000593946 RBBP6Q7Z6E9 1792 aaKnown RBP23.72■■□□□ 1.39
PNKP-203ENST00000593946 ZNF536O15090 1300 aa23.72■■□□□ 1.39
PNKP-203ENST00000593946 MEIS2O14770 477 aa23.72■■□□□ 1.39
PNKP-203ENST00000593946 CUTAO60888 179 aa23.72■■□□□ 1.39
PNKP-203ENST00000593946 TAL1P17542 331 aaPredicted RBP23.72■■□□□ 1.39
PNKP-203ENST00000593946 PTPREP23469 700 aa23.72■■□□□ 1.39
PNKP-203ENST00000593946 LDLRAD1Q5T700 205 aa23.72■■□□□ 1.39
PNKP-203ENST00000593946 TEX2Q8IWB9 1127 aa23.72■■□□□ 1.39
PNKP-203ENST00000593946 MRPS27Q92552 414 aaKnown RBP23.72■■□□□ 1.39
PNKP-203ENST00000593946 GOLPH3LQ9H4A5 285 aa23.72■■□□□ 1.39
PNKP-203ENST00000593946 SLC38A10Q9HBR0 1119 aa23.72■■□□□ 1.39
PNKP-203ENST00000593946 NMRK2Q9NPI5 230 aa23.72■■□□□ 1.39
PNKP-203ENST00000593946 ICAM1P05362 532 aa23.71■■□□□ 1.39
PNKP-203ENST00000593946 ATP2C1P98194 919 aaPredicted RBP23.71■■□□□ 1.39
PNKP-203ENST00000593946 ZSCAN23Q3MJ62 389 aa23.71■■□□□ 1.39
PNKP-203ENST00000593946 FSIP1Q8NA03 581 aa23.71■■□□□ 1.39
PNKP-203ENST00000593946 TBCKQ8TEA7 893 aa23.71■■□□□ 1.39
PNKP-203ENST00000593946 USP17L15C9J2P7 530 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 USP17L13C9JLJ4 530 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 USP17L11C9JVI0 530 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 USP17L18D6R9N7 530 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 USP17L22D6RA61 530 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 USP17L17D6RBQ6 530 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 USP17L19D6RCP7 530 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 USP17L20D6RJB6 530 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 FDX1P10109 184 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 CMA1P23946 247 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 MCM7P33993 719 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 USP17L24Q0WX57 530 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 PTGDRQ13258 359 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 CCDC183Q5T5S1 534 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 USP17L6PQ6QN14 398 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 NEK8Q86SG6 692 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 SRPRBQ9Y5M8 271 aaKnown RBP23.7■■□□□ 1.39
PNKP-203ENST00000593946 MRVI1Q9Y6F6 885 aa23.7■■□□□ 1.39
PNKP-203ENST00000593946 ABCB11O95342 1321 aa23.7■■□□□ 1.38
PNKP-203ENST00000593946 NR1I2O75469 434 aa23.7■■□□□ 1.38
PNKP-203ENST00000593946 FMR1Q06787 632 aaKnown RBP eCLIP23.7■■□□□ 1.38
PNKP-203ENST00000593946 OTUD5Q96G74 571 aa23.7■■□□□ 1.38
PNKP-203ENST00000593946 DACT1Q9NYF0 836 aa23.7■■□□□ 1.38
PNKP-203ENST00000593946 TRPM7Q96QT4 1865 aa23.69■■□□□ 1.38
PNKP-203ENST00000593946 UNCXA6NJT0 531 aa23.69■■□□□ 1.38
PNKP-203ENST00000593946 IRF6O14896 467 aa23.69■■□□□ 1.38
PNKP-203ENST00000593946 PPIL2Q13356 520 aa23.69■■□□□ 1.38
PNKP-203ENST00000593946 AP3B2Q13367 1082 aa23.69■■□□□ 1.38
PNKP-203ENST00000593946 MCTP2Q6DN12 878 aa23.69■■□□□ 1.38
PNKP-203ENST00000593946 CATSPERGQ6ZRH7 1159 aa23.69■■□□□ 1.38
PNKP-203ENST00000593946 CCDC73Q6ZRK6 1079 aa23.69■■□□□ 1.38
PNKP-203ENST00000593946 C4orf32Q8N8J7 132 aa23.69■■□□□ 1.38
PNKP-203ENST00000593946 ENGASEQ8NFI3 743 aa23.69■■□□□ 1.38
PNKP-203ENST00000593946 CLIC6Q96NY7 704 aa23.69■■□□□ 1.38
PNKP-203ENST00000593946 DDX19AQ9NUU7 478 aaKnown RBP23.69■■□□□ 1.38
PNKP-203ENST00000593946 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.69■■□□□ 1.38
PNKP-203ENST00000593946 MRPL11Q9Y3B7 192 aaKnown RBP23.69■■□□□ 1.38
PNKP-203ENST00000593946 A0A0G2JLL6 359 aaPredicted RBP23.68■■□□□ 1.38
PNKP-203ENST00000593946 PIK3CDO00329 1044 aa23.68■■□□□ 1.38
PNKP-203ENST00000593946 FAM160A1Q05DH4 1040 aa23.68■■□□□ 1.38
PNKP-203ENST00000593946 SNW1Q13573 536 aaKnown RBP23.68■■□□□ 1.38
PNKP-203ENST00000593946 SHC4Q6S5L8 630 aa23.68■■□□□ 1.38
PNKP-203ENST00000593946 PRRT2Q7Z6L0 340 aaPredicted RBP23.68■■□□□ 1.38
PNKP-203ENST00000593946 ZNF579Q8NAF0 562 aaKnown RBP23.68■■□□□ 1.38
PNKP-203ENST00000593946 FERMT2Q96AC1 680 aa23.68■■□□□ 1.38
PNKP-203ENST00000593946 ADAMTS5Q9UNA0 930 aa23.68■■□□□ 1.38
PNKP-203ENST00000593946 KCNH4Q9UQ05 1017 aa23.68■■□□□ 1.38
PNKP-203ENST00000593946 VWA5AO00534 786 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 CXCL11O14625 94 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 GRIN1Q05586 938 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 ORC2Q13416 577 aaPredicted RBP23.67■■□□□ 1.38
PNKP-203ENST00000593946 LETM2Q2VYF4 491 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 RESP18Q5W5W9 173 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 ATG4CQ96DT6 458 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 AGBL1Q96MI9 1066 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 ZNF408Q9H9D4 720 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 CCPG1Q9ULG6 757 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 A0A0G2JMZ2 1700 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 MYPNQ86TC9 1320 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 FAM237AA0A1B0GTK4 181 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 A0A1B0GVL5 298 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 EDIL3O43854 480 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 DSG3P32926 999 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 GSE1Q14687 1217 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 COG2Q14746 738 aa23.67■■□□□ 1.38
PNKP-203ENST00000593946 PROCA1Q8NCQ7 364 aaPredicted RBP23.67■■□□□ 1.38
PNKP-203ENST00000593946 ZBED4O75132 1171 aa23.66■■□□□ 1.38
PNKP-203ENST00000593946 NDUFA8P51970 172 aa23.66■■□□□ 1.38
PNKP-203ENST00000593946 FKBP1BP68106 108 aa23.66■■□□□ 1.38
PNKP-203ENST00000593946 ARL6IP4Q66PJ3 421 aaKnown RBP23.66■■□□□ 1.38
PNKP-203ENST00000593946 FMR1NBQ8N0W7 255 aaPredicted RBP23.66■■□□□ 1.38
PNKP-203ENST00000593946 ZNF526Q8TF50 670 aaPredicted RBP23.66■■□□□ 1.38
PNKP-203ENST00000593946 OPTNQ96CV9 577 aa23.66■■□□□ 1.38
PNKP-203ENST00000593946 WNK4Q96J92 1243 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms