RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 MTMR10Q9NXD2 777 aa14.39□□□□□ -0.11
VAT1-206ENST00000589709 CCPG1Q9ULG6 757 aa14.39□□□□□ -0.11
VAT1-206ENST00000589709 LOC102724159A0A0B4J2E5 919 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 MYADML2A6NDP7 307 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 DCDC2CA8MYV0 355 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 ZNF213O14771 459 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 CTAGE5O15320 804 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 PQBP1O60828 265 aaKnown RBP14.38□□□□□ -0.11
VAT1-206ENST00000589709 SNHG28P0DPA3 235 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 PDHBP11177 359 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 SLC16A2P36021 539 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 CDK7P50613 346 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 TNFAIP2Q03169 654 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 FAAP100Q0VG06 881 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 PWP2Q15269 919 aaKnown RBP14.38□□□□□ -0.11
VAT1-206ENST00000589709 SHHQ15465 462 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 GNASQ5JWF2 1037 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 Q7L0L9 218 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 DGKHQ86XP1 1220 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 TBC1D10CQ8IV04 446 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 MORC4Q8TE76 937 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 ESR2Q92731 530 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 DIAPH3Q9NSV4 1193 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 TMEM39AQ9NV64 488 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 MTMR7Q9Y216 660 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 LTBP2Q14767 1821 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 ASTN1O14525 1302 aa14.38□□□□□ -0.11
VAT1-206ENST00000589709 ASGR1P07306 291 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 RAG1P15918 1043 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 ITGB8P26012 769 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 CCDC178Q5BJE1 867 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 C9orf50Q5SZB4 431 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 IQSEC1Q6DN90 963 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 CWC27Q6UX04 472 aaKnown RBP14.37□□□□□ -0.11
VAT1-206ENST00000589709 NSMFQ6X4W1 530 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 ANKS1AQ92625 1134 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 GPCPD1Q9NPB8 672 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 ADD3Q9UEY8 706 aaKnown RBP14.37□□□□□ -0.11
VAT1-206ENST00000589709 GNEQ9Y223 722 aaKnown RBP14.37□□□□□ -0.11
VAT1-206ENST00000589709 STXBP5LQ9Y2K9 1186 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 Q9Y3F1 56 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 MROH7Q68CQ1 1323 aa14.37□□□□□ -0.11
VAT1-206ENST00000589709 IRX5P78411 483 aaPredicted RBP14.36□□□□□ -0.11
VAT1-206ENST00000589709 TAPT1Q6NXT6 567 aa14.36□□□□□ -0.11
VAT1-206ENST00000589709 DSCC1Q9BVC3 393 aa14.36□□□□□ -0.11
VAT1-206ENST00000589709 VTA1Q9NP79 307 aa14.36□□□□□ -0.11
VAT1-206ENST00000589709 TBX21Q9UL17 535 aa14.36□□□□□ -0.11
VAT1-206ENST00000589709 MCM3APO60318 1980 aa14.36□□□□□ -0.11
VAT1-206ENST00000589709 FRMPD2Q68DX3 1309 aaPredicted RBP14.36□□□□□ -0.11
VAT1-206ENST00000589709 WDR19Q8NEZ3 1342 aa14.36□□□□□ -0.11
VAT1-206ENST00000589709 A0A0U1RQG5 324 aaPredicted RBP14.35□□□□□ -0.11
VAT1-206ENST00000589709 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.35□□□□□ -0.11
VAT1-206ENST00000589709 ARVCFO00192 962 aa14.35□□□□□ -0.11
VAT1-206ENST00000589709 CABYRO75952 493 aa14.35□□□□□ -0.11
VAT1-206ENST00000589709 SMPD1P17405 629 aa14.35□□□□□ -0.11
VAT1-206ENST00000589709 BAATQ14032 418 aaPredicted RBP14.35□□□□□ -0.11
VAT1-206ENST00000589709 GPATCH4Q5T3I0 446 aaKnown RBP14.35□□□□□ -0.11
VAT1-206ENST00000589709 NOL8Q76FK4 1167 aaKnown RBP14.35□□□□□ -0.11
VAT1-206ENST00000589709 CLEC4DQ8WXI8 215 aa14.35□□□□□ -0.11
VAT1-206ENST00000589709 SEZ6LQ9BYH1 1024 aa14.35□□□□□ -0.11
VAT1-206ENST00000589709 MAF1Q9H063 256 aa14.35□□□□□ -0.11
VAT1-206ENST00000589709 AP5M1Q9H0R1 490 aa14.35□□□□□ -0.11
VAT1-206ENST00000589709 CTNNA3Q9UI47 895 aa14.35□□□□□ -0.11
VAT1-206ENST00000589709 NEDD4P46934 1319 aa14.35□□□□□ -0.11
VAT1-206ENST00000589709 NFIBO00712 420 aa14.34□□□□□ -0.11
VAT1-206ENST00000589709 TIMP1P01033 207 aa14.34□□□□□ -0.11
VAT1-206ENST00000589709 EPHB4P54760 987 aa14.34□□□□□ -0.11
VAT1-206ENST00000589709 SMAD3P84022 425 aaKnown RBP14.34□□□□□ -0.11
VAT1-206ENST00000589709 FPGSQ05932 587 aa14.34□□□□□ -0.11
VAT1-206ENST00000589709 TLK2Q86UE8 772 aa14.34□□□□□ -0.11
VAT1-206ENST00000589709 IQCA1Q86XH1 822 aa14.34□□□□□ -0.11
VAT1-206ENST00000589709 SLC43A3Q8NBI5 491 aa14.34□□□□□ -0.11
VAT1-206ENST00000589709 SLC17A8Q8NDX2 589 aa14.34□□□□□ -0.11
VAT1-206ENST00000589709 RGS22Q8NE09 1264 aa14.34□□□□□ -0.11
VAT1-206ENST00000589709 VTI1AQ96AJ9 217 aa14.34□□□□□ -0.11
VAT1-206ENST00000589709 PDGFCQ9NRA1 345 aa14.34□□□□□ -0.11
VAT1-206ENST00000589709 RBM47A0AV96 593 aaKnown RBP14.33□□□□□ -0.12
VAT1-206ENST00000589709 DYNC1LI2O43237 492 aaPredicted RBP14.33□□□□□ -0.12
VAT1-206ENST00000589709 ZEB2O60315 1214 aa14.33□□□□□ -0.12
VAT1-206ENST00000589709 KDM4AO75164 1064 aa14.33□□□□□ -0.12
VAT1-206ENST00000589709 ALDH5A1P51649 535 aaPredicted RBP14.33□□□□□ -0.12
VAT1-206ENST00000589709 BEX3Q00994 111 aa14.33□□□□□ -0.12
VAT1-206ENST00000589709 FSCN1Q16658 493 aaKnown RBP14.33□□□□□ -0.12
VAT1-206ENST00000589709 IMMTQ16891 758 aaKnown RBP14.33□□□□□ -0.12
VAT1-206ENST00000589709 DUSP28Q4G0W2 176 aa14.33□□□□□ -0.12
VAT1-206ENST00000589709 MFSD5Q6N075 450 aa14.33□□□□□ -0.12
VAT1-206ENST00000589709 FBXO16Q8IX29 292 aaPredicted RBP14.33□□□□□ -0.12
VAT1-206ENST00000589709 FAM126BQ8IXS8 530 aa14.33□□□□□ -0.12
VAT1-206ENST00000589709 PURBQ96QR8 312 aaKnown RBP14.33□□□□□ -0.12
VAT1-206ENST00000589709 TLR3O15455 904 aaKnown RBP14.32□□□□□ -0.12
VAT1-206ENST00000589709 CD4P01730 458 aa14.32□□□□□ -0.12
VAT1-206ENST00000589709 ZNF697Q5TEC3 545 aa14.32□□□□□ -0.12
VAT1-206ENST00000589709 CXCL17Q6UXB2 119 aa14.32□□□□□ -0.12
VAT1-206ENST00000589709 RNF207Q6ZRF8 634 aa14.32□□□□□ -0.12
VAT1-206ENST00000589709 KIAA1211Q6ZU35 1233 aa14.32□□□□□ -0.12
VAT1-206ENST00000589709 EEPD1Q7L9B9 569 aa14.32□□□□□ -0.12
VAT1-206ENST00000589709 PNMA1Q8ND90 353 aa14.32□□□□□ -0.12
VAT1-206ENST00000589709 ZSCAN10Q96SZ4 725 aaPredicted RBP14.32□□□□□ -0.12
VAT1-206ENST00000589709 ZKSCAN3Q9BRR0 538 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms