RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 TARBP2Q15633 366 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-206ENST00000581631 ZXDCQ2QGD7 858 aaPredicted RBP6.47□□□□□ -1.37
SMCHD1-206ENST00000581631 CYP2R1Q6VVX0 501 aa6.47□□□□□ -1.37
SMCHD1-206ENST00000581631 TAB3Q8N5C8 712 aaPredicted RBP6.47□□□□□ -1.37
SMCHD1-206ENST00000581631 RNF38Q9H0F5 515 aa6.47□□□□□ -1.37
SMCHD1-206ENST00000581631 PDLIM7Q9NR12 457 aa6.47□□□□□ -1.37
SMCHD1-206ENST00000581631 ZNRF3Q9ULT6 936 aa6.47□□□□□ -1.37
SMCHD1-206ENST00000581631 ITGAEP38570 1179 aa6.46□□□□□ -1.38
SMCHD1-206ENST00000581631 ZNF445P59923 1031 aa6.46□□□□□ -1.38
SMCHD1-206ENST00000581631 HS2ST1Q7LGA3 356 aa6.46□□□□□ -1.38
SMCHD1-206ENST00000581631 NLGN2Q8NFZ4 835 aa6.46□□□□□ -1.38
SMCHD1-206ENST00000581631 NKD1Q969G9 470 aa6.46□□□□□ -1.38
SMCHD1-206ENST00000581631 SPATA25Q9BR10 227 aa6.46□□□□□ -1.38
SMCHD1-206ENST00000581631 DSCC1Q9BVC3 393 aa6.46□□□□□ -1.38
SMCHD1-206ENST00000581631 SUSD2Q9UGT4 822 aa6.46□□□□□ -1.38
SMCHD1-206ENST00000581631 GGT7Q9UJ14 662 aa6.46□□□□□ -1.38
SMCHD1-206ENST00000581631 ERCC3P19447 782 aa6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 MCM4P33991 863 aa6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 AXDND1Q5T1B0 1012 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 DCAF15Q66K64 600 aa6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 LSRQ86X29 649 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 ZNF526Q8TF50 670 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 SMARCC1Q92922 1105 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 DHRS1Q96LJ7 313 aa6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 FCRL3Q96P31 734 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 TMPRSS5Q9H3S3 457 aa6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 GP6Q9HCN6 339 aa6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 FHOD1Q9Y613 1164 aa6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 PMF1-BGLAPU3KQ54 211 aa6.45□□□□□ -1.38
SMCHD1-206ENST00000581631 GLI4P10075 376 aa6.44□□□□□ -1.38
SMCHD1-206ENST00000581631 MC3RP41968 323 aa6.44□□□□□ -1.38
SMCHD1-206ENST00000581631 PRR5P85299 388 aa6.44□□□□□ -1.38
SMCHD1-206ENST00000581631 LDLRAD1Q5T700 205 aa6.44□□□□□ -1.38
SMCHD1-206ENST00000581631 NT5DC1Q5TFE4 455 aa6.44□□□□□ -1.38
SMCHD1-206ENST00000581631 TDRD10Q5VZ19 366 aaKnown RBP6.44□□□□□ -1.38
SMCHD1-206ENST00000581631 CCDC144CPQ8IYA2 1237 aa6.44□□□□□ -1.38
SMCHD1-206ENST00000581631 NAT16Q8N8M0 369 aa6.44□□□□□ -1.38
SMCHD1-206ENST00000581631 MYRFQ9Y2G1 1151 aa6.44□□□□□ -1.38
SMCHD1-206ENST00000581631 DUSP10Q9Y6W6 482 aa6.44□□□□□ -1.38
SMCHD1-206ENST00000581631 FAM86C2PA6NEL3 165 aa6.43□□□□□ -1.38
SMCHD1-206ENST00000581631 ASGR2P07307 311 aa6.43□□□□□ -1.38
SMCHD1-206ENST00000581631 PTCHD1Q96NR3 888 aa6.43□□□□□ -1.38
SMCHD1-206ENST00000581631 NOBOXO60393 691 aa6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 IFNGR1P15260 489 aa6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 CD247P20963 164 aa6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 CWF19L1Q69YN2 538 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 BICRALQ6AI39 1079 aa6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 B3GNT8Q7Z7M8 397 aa6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 FERMT3Q86UX7 667 aa6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 JAMLQ86YT9 394 aa6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 TSPAN17Q96FV3 270 aa6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 RBM15Q96T37 977 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 FBLN5Q9UBX5 448 aa6.42□□□□□ -1.38
SMCHD1-206ENST00000581631 A0A1W2PQ27 194 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 A0A1W2PQ64 194 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 A0A1W2PQC6 194 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 A0A1W2PQD8 194 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 F8W031 263 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 K7ESM1 405 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 NCAM1P13591 858 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 INSRRP14616 1297 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 TACR1P25103 407 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 ZYXQ15942 572 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 UBXN11Q5T124 520 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 CARFQ8N187 725 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 FIBCD1Q8N539 461 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 BRF1Q92994 677 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 LNPKQ9C0E8 428 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 ZNF451Q9Y4E5 1061 aa6.41□□□□□ -1.38
SMCHD1-206ENST00000581631 CBFA2T2O43439 604 aa6.4□□□□□ -1.38
SMCHD1-206ENST00000581631 ADAM17P78536 824 aa6.4□□□□□ -1.38
SMCHD1-206ENST00000581631 KIAA0825Q8IV33 1275 aa6.4□□□□□ -1.38
SMCHD1-206ENST00000581631 RBBP8NLQ8NC74 664 aaPredicted RBP6.4□□□□□ -1.38
SMCHD1-206ENST00000581631 TM9SF2Q99805 663 aa6.4□□□□□ -1.38
SMCHD1-206ENST00000581631 MCMBPQ9BTE3 642 aa6.4□□□□□ -1.38
SMCHD1-206ENST00000581631 SPATA6Q9NWH7 488 aaPredicted RBP6.4□□□□□ -1.38
SMCHD1-206ENST00000581631 ITGB3P05106 788 aa6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 IMPDH2P12268 514 aa6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 PMLP29590 882 aa6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 L1CAMP32004 1257 aa6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 MAGEA10P43363 369 aaPredicted RBP6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 NOP2P46087 812 aaKnown RBP6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 PUM1Q14671 1186 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 RCSD1Q6JBY9 416 aa6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 UNC5AQ6ZN44 842 aa6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 NOX5Q96PH1 765 aa6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 SPON2Q9BUD6 331 aa6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 USP40Q9NVE5 1235 aa6.39□□□□□ -1.39
SMCHD1-206ENST00000581631 A0A087WZG4 1122 aa6.38□□□□□ -1.39
SMCHD1-206ENST00000581631 TNFRSF1AP19438 455 aa6.38□□□□□ -1.39
SMCHD1-206ENST00000581631 CPA5Q8WXQ8 436 aa6.38□□□□□ -1.39
SMCHD1-206ENST00000581631 ALG3Q92685 438 aa6.38□□□□□ -1.39
SMCHD1-206ENST00000581631 BCAS3Q9H6U6 928 aa6.38□□□□□ -1.39
SMCHD1-206ENST00000581631 ZNF214Q9UL59 606 aaPredicted RBP6.38□□□□□ -1.39
SMCHD1-206ENST00000581631 PPP1R11O60927 126 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-206ENST00000581631 TBC1D8O95759 1140 aa6.37□□□□□ -1.39
SMCHD1-206ENST00000581631 CD3EP07766 207 aa6.37□□□□□ -1.39
SMCHD1-206ENST00000581631 CNR2P34972 360 aa6.37□□□□□ -1.39
SMCHD1-206ENST00000581631 ZNF827Q17R98 1081 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms