RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 KCNV2Q8TDN2 545 aa4.57□□□□□ -1.68
NUP85-209ENST00000578987 NUP133Q8WUM0 1156 aa4.57□□□□□ -1.68
NUP85-209ENST00000578987 TRERF1Q96PN7 1200 aa4.57□□□□□ -1.68
NUP85-209ENST00000578987 ARID3AQ99856 593 aa4.57□□□□□ -1.68
NUP85-209ENST00000578987 TSEN34Q9BSV6 310 aaKnown RBP4.57□□□□□ -1.68
NUP85-209ENST00000578987 FSD1Q9BTV5 496 aa4.57□□□□□ -1.68
NUP85-209ENST00000578987 TEX13BQ9BXU2 312 aa4.57□□□□□ -1.68
NUP85-209ENST00000578987 KATNBL1Q9H079 304 aa4.57□□□□□ -1.68
NUP85-209ENST00000578987 CHMP4BQ9H444 224 aaKnown RBP4.57□□□□□ -1.68
NUP85-209ENST00000578987 SLC38A10Q9HBR0 1119 aa4.57□□□□□ -1.68
NUP85-209ENST00000578987 IL17RBQ9NRM6 502 aa4.57□□□□□ -1.68
NUP85-209ENST00000578987 WDR70Q9NW82 654 aa4.57□□□□□ -1.68
NUP85-209ENST00000578987 LAMA2P24043 3122 aaKnown RBP4.57□□□□□ -1.68
NUP85-209ENST00000578987 LRRC37A2A6NM11 1700 aa4.57□□□□□ -1.68
NUP85-209ENST00000578987 KAT6AQ92794 2004 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 UNC80Q8N2C7 3258 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 ZNF536O15090 1300 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 GRIN2DO15399 1336 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 UMODL1Q5DID0 1318 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 FRMPD2Q68DX3 1309 aaPredicted RBP4.56□□□□□ -1.68
NUP85-209ENST00000578987 SYNGAP1Q96PV0 1343 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 MOXD2PA6NHM9 499 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 TSPY2A6NKD2 308 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 ARVCFO00192 962 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 ATP2A1O14983 1001 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 FOXP2O15409 715 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 RANBP6O60518 1105 aaKnown RBP4.56□□□□□ -1.68
NUP85-209ENST00000578987 ZFYP08048 801 aaPredicted RBP4.56□□□□□ -1.68
NUP85-209ENST00000578987 MYOGP15173 224 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 SMPD1P17405 629 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 DNAJB2P25686 324 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 COPB2P35606 906 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 STAT2P52630 851 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 RABGGTBP53611 331 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 TNFAIP2Q03169 654 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 PDE4BQ07343 736 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 RRP12Q5JTH9 1297 aaKnown RBP4.56□□□□□ -1.68
NUP85-209ENST00000578987 ZMYM1Q5SVZ6 1142 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 RCSD1Q6JBY9 416 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 MFSD5Q6N075 450 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 TAPT1Q6NXT6 567 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 NSMFQ6X4W1 530 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 OTOP2Q7RTS6 562 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 ANKRD33Q7Z3H0 272 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 ZNF467Q7Z7K2 595 aaPredicted RBP4.56□□□□□ -1.68
NUP85-209ENST00000578987 CHST13Q8NET6 341 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 CHURC1Q8WUH1 139 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 STAG1Q8WVM7 1258 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 SCLYQ96I15 445 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 GLT1D1Q96MS3 346 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 NAPBQ9H115 298 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 ABHD16BQ9H3Z7 469 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 PRDM12Q9H4Q4 367 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 ZNF576Q9H609 170 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 SPC25Q9HBM1 224 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 GPCPD1Q9NPB8 672 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 A1CFQ9NQ94 594 aaKnown RBP4.56□□□□□ -1.68
NUP85-209ENST00000578987 TOMM22Q9NS69 142 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 RNF146Q9NTX7 359 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 NRBP1Q9UHY1 535 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 PRR12Q9ULL5 1215 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 STX8Q9UNK0 236 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 LOXHD1Q8IVV2 1947 aa4.56□□□□□ -1.68
NUP85-209ENST00000578987 ROBO3Q96MS0 1386 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 A0A0U1RQG5 324 aaPredicted RBP4.55□□□□□ -1.68
NUP85-209ENST00000578987 RFXAPO00287 272 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 RIOK3O14730 519 aaKnown RBP4.55□□□□□ -1.68
NUP85-209ENST00000578987 ERC2O15083 957 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 TLR3O15455 904 aaKnown RBP4.55□□□□□ -1.68
NUP85-209ENST00000578987 B4GALT4O60513 344 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 CD4P01730 458 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 FGBP02675 491 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 SLC3A2P08195 630 aaKnown RBP4.55□□□□□ -1.68
NUP85-209ENST00000578987 GNAT2P19087 354 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 IGFBP4P22692 258 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 SLC1A4P43007 532 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 CHMP4BP1P59074 171 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 HAND2P61296 217 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 ITGA7Q13683 1181 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 BAATQ14032 418 aaPredicted RBP4.55□□□□□ -1.68
NUP85-209ENST00000578987 CCDC96Q2M329 555 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 IQSEC1Q6DN90 963 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 KIAA1211Q6ZU35 1233 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 FAM160B2Q86V87 743 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 FBXO16Q8IX29 292 aaPredicted RBP4.55□□□□□ -1.68
NUP85-209ENST00000578987 FAM126BQ8IXS8 530 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 TMEM199Q8N511 208 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 MSL3Q8N5Y2 521 aaKnown RBP4.55□□□□□ -1.68
NUP85-209ENST00000578987 FAM133AQ8N9E0 248 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 PCSK9Q8NBP7 692 aaKnown RBP4.55□□□□□ -1.68
NUP85-209ENST00000578987 GMCL1P1Q8NEA9 526 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 COPS5Q92905 334 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 TIFAQ96CG3 184 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 GPATCH3Q96I76 525 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 FAM227BQ96M60 508 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 YTHDC1Q96MU7 727 aaKnown RBP4.55□□□□□ -1.68
NUP85-209ENST00000578987 TOX2Q96NM4 488 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 CRBNQ96SW2 442 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 ZKSCAN3Q9BRR0 538 aa4.55□□□□□ -1.68
NUP85-209ENST00000578987 PBX4Q9BYU1 374 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms