RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 PAGE5Q96GU1 130 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 EPSTI1Q96J88 318 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 MYOZ2Q9NPC6 264 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 BIN2Q9UBW5 565 aaPredicted RBP12.58□□□□□ -0.4
SKA2-204ENST00000578519 MAN1B1Q9UKM7 699 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 PCDHA1Q9Y5I3 950 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.57□□□□□ -0.4
SKA2-204ENST00000578519 USP17L10C9JJH3 530 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 PLA2G6O60733 806 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 GDF11O95390 407 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 ASNSP08243 561 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 CDK11BP21127 795 aaKnown RBP12.57□□□□□ -0.4
SKA2-204ENST00000578519 USP11P51784 963 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 GRIN1Q05586 938 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 STIM1Q13586 685 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 MORC3Q14149 939 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 PDIA5Q14554 519 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 CALCRLQ16602 461 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 ANKRD20A12PQ8NF67 263 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 SPATA20Q8TB22 786 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 ENOX1Q8TC92 643 aaKnown RBP12.57□□□□□ -0.4
SKA2-204ENST00000578519 RASGRP4Q8TDF6 673 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 BCS1LQ9Y276 419 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 TMX2Q9Y320 296 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 PCDHAC2Q9Y5I4 1007 aa12.57□□□□□ -0.4
SKA2-204ENST00000578519 KIF13BQ9NQT8 1826 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 TMEM232C9JQI7 657 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 H7C1D1 291 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 NDUFB10O96000 172 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 SERPINC1P01008 464 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 AFMP43652 599 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 STAT2P52630 851 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 ZNF280AP59817 542 aaPredicted RBP12.56□□□□□ -0.4
SKA2-204ENST00000578519 CDC37Q16543 378 aaPredicted RBP12.56□□□□□ -0.4
SKA2-204ENST00000578519 TPD52L1Q16890 204 aaPredicted RBP12.56□□□□□ -0.4
SKA2-204ENST00000578519 QRICH1Q2TAL8 776 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 DCAF15Q66K64 600 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 TTBK2Q6IQ55 1244 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 MOXD1Q6UVY6 613 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.56□□□□□ -0.4
SKA2-204ENST00000578519 CABP7Q86V35 215 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 SPC24Q8NBT2 197 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 ERCC4Q92889 916 aaPredicted RBP12.56□□□□□ -0.4
SKA2-204ENST00000578519 ZBED3Q96IU2 234 aaPredicted RBP12.56□□□□□ -0.4
SKA2-204ENST00000578519 CPVLQ9H3G5 476 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 DISC1Q9NRI5 854 aa12.56□□□□□ -0.4
SKA2-204ENST00000578519 MYH8P13535 1937 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 SPDYE3A6NKU9 549 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 SLC16A2P36021 539 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 CAP2P40123 477 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 MAP3K10Q02779 954 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 R3HDM1Q15032 1099 aaKnown RBP12.55□□□□□ -0.4
SKA2-204ENST00000578519 FILIP1LQ4L180 1135 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 NOM1Q5C9Z4 860 aaKnown RBP12.55□□□□□ -0.4
SKA2-204ENST00000578519 KRT79Q5XKE5 535 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 SLFN12Q8IYM2 578 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 CTAGE1Q96RT6 745 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 RRAGDQ9NQL2 400 aaPredicted RBP12.55□□□□□ -0.4
SKA2-204ENST00000578519 STK17AQ9UEE5 414 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 FEM1BQ9UK73 627 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 ZBTB21Q9ULJ3 1066 aa12.55□□□□□ -0.4
SKA2-204ENST00000578519 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.55□□□□□ -0.4
SKA2-204ENST00000578519 PSME4Q14997 1843 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 FAM196BA6NMK8 535 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 WNT10BO00744 389 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 CLK2P49760 499 aaKnown RBP12.54□□□□□ -0.4
SKA2-204ENST00000578519 UBASH3AP57075 661 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 FANCCQ00597 558 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 SPAG1Q07617 926 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 DPYDQ12882 1025 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 KCNB1Q14721 858 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 E2F4Q16254 413 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 ISM2Q6H9L7 571 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 USP49Q70CQ1 688 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 CLEC10AQ8IUN9 316 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 SAMD3Q8N6K7 520 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 VCPKMTQ9H867 229 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 LRWD1Q9UFC0 647 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 MRPL11Q9Y3B7 192 aaKnown RBP12.54□□□□□ -0.4
SKA2-204ENST00000578519 RABGAP1Q9Y3P9 1069 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
SKA2-204ENST00000578519 TBX3O15119 743 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 AP5Z1O43299 807 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 FDX1P10109 184 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 SPATA1Q5VX52 437 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 CCDC186Q7Z3E2 898 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 SIAH1Q8IUQ4 282 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 APOBEC3FQ8IUX4 373 aaKnown RBP12.53□□□□□ -0.4
SKA2-204ENST00000578519 KCTD17Q8N5Z5 321 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 CCDC150Q8NCX0 1101 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 NT5C3AQ9H0P0 336 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 AS3MTQ9HBK9 375 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
SKA2-204ENST00000578519 DDX25Q9UHL0 483 aaKnown RBP12.53□□□□□ -0.4
SKA2-204ENST00000578519 CTDP1Q9Y5B0 961 aaPredicted RBP12.53□□□□□ -0.4
SKA2-204ENST00000578519 KDM3AQ9Y4C1 1321 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 CNTNAP1P78357 1384 aa12.53□□□□□ -0.4
SKA2-204ENST00000578519 GREB1LQ9C091 1923 aaPredicted RBP12.52□□□□□ -0.4
SKA2-204ENST00000578519 POTEMA6NI47 508 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms