RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 NOL7Q9UMY1 257 aaKnown RBP15.38■□□□□ 0.05
SRSF1-202ENST00000578430 MRPL11Q9Y3B7 192 aaKnown RBP15.38■□□□□ 0.05
SRSF1-202ENST00000578430 VWA5AO00534 786 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 ATP2A1O14983 1001 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 GJA5P36382 358 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 VEGFBP49765 207 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 NR5A1Q13285 461 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 NFKBIBQ15653 356 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 SPRYD7Q5W111 196 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 KRT25Q7Z3Z0 450 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 REXO1Q8N1G1 1221 aaKnown RBP15.37■□□□□ 0.05
SRSF1-202ENST00000578430 SAMD3Q8N6K7 520 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 MB21D1Q8N884 522 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 TMEM87AQ8NBN3 555 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 OXER1Q8TDS5 423 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.37■□□□□ 0.05
SRSF1-202ENST00000578430 SLC45A1Q9Y2W3 748 aa15.37■□□□□ 0.05
SRSF1-202ENST00000578430 PARP14Q460N5 1801 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 CCDC194A0A1B0GVG4 234 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 TMEM88BA6NKF7 163 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 NCLP19338 710 aaKnown RBP15.36■□□□□ 0.05
SRSF1-202ENST00000578430 OSBPP22059 807 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 IRX3P78415 501 aaPredicted RBP15.36■□□□□ 0.05
SRSF1-202ENST00000578430 MOGSQ13724 837 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 CCDC174Q6PII3 467 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 LBX2Q6XYB7 198 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 GTF3C2Q8WUA4 911 aaPredicted RBP15.36■□□□□ 0.05
SRSF1-202ENST00000578430 ATG4CQ96DT6 458 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 POLR3EQ9NVU0 708 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 RTEL1Q9NZ71 1219 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 PNMA3Q9UL41 463 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 PCDHA6Q9UN73 950 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 PCDHA8Q9Y5H6 950 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 MYH15Q9Y2K3 1946 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 ELP1O95163 1332 aa15.36■□□□□ 0.05
SRSF1-202ENST00000578430 RLFQ13129 1914 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 PIK3CDO00329 1044 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 YEATS4O95619 227 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 BMP15O95972 392 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 FOSP01100 380 aaPredicted RBP15.35■□□□□ 0.05
SRSF1-202ENST00000578430 CLK2P49760 499 aaKnown RBP15.35■□□□□ 0.05
SRSF1-202ENST00000578430 SNAP25P60880 206 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 AP3B2Q13367 1082 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 TKFCQ3LXA3 575 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 FOXD4L6Q3SYB3 417 aaPredicted RBP15.35■□□□□ 0.05
SRSF1-202ENST00000578430 USH1GQ495M9 461 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 TREML2Q5T2D2 321 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 FAM173BQ6P4H8 233 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 FOXD4L3Q6VB84 417 aaPredicted RBP15.35■□□□□ 0.05
SRSF1-202ENST00000578430 CHRDL2Q6WN34 429 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 SAPCD2Q86UD0 394 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 HHIPL1Q96JK4 782 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 MAP3K20Q9NYL2 800 aaKnown RBP15.35■□□□□ 0.05
SRSF1-202ENST00000578430 CCPG1Q9ULG6 757 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 CEP131Q9UPN4 1083 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 ZNF536O15090 1300 aa15.35■□□□□ 0.05
SRSF1-202ENST00000578430 SPDYE16A6NNV3 312 aaPredicted RBP15.34■□□□□ 0.05
SRSF1-202ENST00000578430 NASPP49321 788 aaPredicted RBP15.34■□□□□ 0.05
SRSF1-202ENST00000578430 NONOQ15233 471 aaKnown RBP eCLIP15.34■□□□□ 0.05
SRSF1-202ENST00000578430 ANO1Q5XXA6 986 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 GPAT2Q6NUI2 795 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 RGMBQ6NW40 437 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 MCF2L2Q86YR7 1114 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 REPS2Q8NFH8 660 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 MS4A4AQ96JQ5 239 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 SPATA32Q96LK8 384 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 USP28Q96RU2 1077 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 PRDM10Q9NQV6 1147 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 TFIP11Q9UBB9 837 aaKnown RBP15.34■□□□□ 0.05
SRSF1-202ENST00000578430 RCOR1Q9UKL0 485 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 CNPY2Q9Y2B0 182 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 TLL2Q9Y6L7 1015 aa15.34■□□□□ 0.05
SRSF1-202ENST00000578430 MORC2Q9Y6X9 1032 aaPredicted RBP15.34■□□□□ 0.05
SRSF1-202ENST00000578430 CTCFP49711 727 aaPredicted RBP15.33■□□□□ 0.04
SRSF1-202ENST00000578430 ZNF157P51786 506 aaPredicted RBP15.33■□□□□ 0.04
SRSF1-202ENST00000578430 GHRHRQ02643 423 aa15.33■□□□□ 0.04
SRSF1-202ENST00000578430 ORC2Q13416 577 aaPredicted RBP15.33■□□□□ 0.04
SRSF1-202ENST00000578430 PIK3AP1Q6ZUJ8 805 aa15.33■□□□□ 0.04
SRSF1-202ENST00000578430 ANKRD23Q86SG2 305 aa15.33■□□□□ 0.04
SRSF1-202ENST00000578430 KCNG4Q8TDN1 519 aa15.33■□□□□ 0.04
SRSF1-202ENST00000578430 LEO1Q8WVC0 666 aaPredicted RBP15.33■□□□□ 0.04
SRSF1-202ENST00000578430 CCDC102AQ96A19 550 aa15.33■□□□□ 0.04
SRSF1-202ENST00000578430 AGBL1Q96MI9 1066 aa15.33■□□□□ 0.04
SRSF1-202ENST00000578430 TEX13BQ9BXU2 312 aa15.33■□□□□ 0.04
SRSF1-202ENST00000578430 ASCC2Q9H1I8 757 aaPredicted RBP15.33■□□□□ 0.04
SRSF1-202ENST00000578430 RAVER2Q9HCJ3 691 aaKnown RBP15.33■□□□□ 0.04
SRSF1-202ENST00000578430 CCL15-CCL14A0A0B4J2E2 113 aa15.32■□□□□ 0.04
SRSF1-202ENST00000578430 TESPA1A2RU30 521 aaPredicted RBP15.32■□□□□ 0.04
SRSF1-202ENST00000578430 MANSC4A6NHS7 340 aaPredicted RBP15.32■□□□□ 0.04
SRSF1-202ENST00000578430 MEIS2O14770 477 aa15.32■□□□□ 0.04
SRSF1-202ENST00000578430 FIBPO43427 364 aa15.32■□□□□ 0.04
SRSF1-202ENST00000578430 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
SRSF1-202ENST00000578430 COPB2P35606 906 aa15.32■□□□□ 0.04
SRSF1-202ENST00000578430 HERVK_113P62684 666 aa15.32■□□□□ 0.04
SRSF1-202ENST00000578430 CCL15Q16663 113 aa15.32■□□□□ 0.04
SRSF1-202ENST00000578430 RASAL3Q86YV0 1011 aa15.32■□□□□ 0.04
SRSF1-202ENST00000578430 CPXCR1Q8N123 301 aa15.32■□□□□ 0.04
SRSF1-202ENST00000578430 LINC00301Q8NCQ3 95 aa15.32■□□□□ 0.04
SRSF1-202ENST00000578430 NAP1L4Q99733 375 aaKnown RBP15.32■□□□□ 0.04
SRSF1-202ENST00000578430 ZCCHC17Q9NP64 241 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms