RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 CCDC174Q6PII3 467 aa21.16■□□□□ 0.98
PRKCA-203ENST00000578063 NEK8Q86SG6 692 aa21.16■□□□□ 0.98
PRKCA-203ENST00000578063 ERO1BQ86YB8 467 aa21.16■□□□□ 0.98
PRKCA-203ENST00000578063 FSIP1Q8NA03 581 aa21.16■□□□□ 0.98
PRKCA-203ENST00000578063 PNMA2Q9UL42 364 aa21.16■□□□□ 0.98
PRKCA-203ENST00000578063 WNT7AO00755 349 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 CMA1P23946 247 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 ATP2C1P98194 919 aaPredicted RBP21.15■□□□□ 0.98
PRKCA-203ENST00000578063 AP3B2Q13367 1082 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 UBE2SQ16763 222 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 TMEM260Q9NX78 707 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.15■□□□□ 0.98
PRKCA-203ENST00000578063 FBXO2Q9UK22 296 aaPredicted RBP21.15■□□□□ 0.98
PRKCA-203ENST00000578063 ABCB11O95342 1321 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 SPDYE5A6NIY4 337 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 UNCXA6NJT0 531 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 ICAM1P05362 532 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 FAM160A1Q05DH4 1040 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 GSE1Q14687 1217 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 SAMD1Q6SPF0 538 aaPredicted RBP21.15■□□□□ 0.98
PRKCA-203ENST00000578063 TBCKQ8TEA7 893 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 FERMT2Q96AC1 680 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 ELP3Q9H9T3 547 aa21.15■□□□□ 0.98
PRKCA-203ENST00000578063 MRPL11Q9Y3B7 192 aaKnown RBP21.15■□□□□ 0.98
PRKCA-203ENST00000578063 SRPRBQ9Y5M8 271 aaKnown RBP21.15■□□□□ 0.98
PRKCA-203ENST00000578063 MCM7P33993 719 aa21.14■□□□□ 0.97
PRKCA-203ENST00000578063 ZNF579Q8NAF0 562 aaKnown RBP21.14■□□□□ 0.97
PRKCA-203ENST00000578063 ZNF526Q8TF50 670 aaPredicted RBP21.14■□□□□ 0.97
PRKCA-203ENST00000578063 GOLPH3LQ9H4A5 285 aa21.14■□□□□ 0.97
PRKCA-203ENST00000578063 SLC38A10Q9HBR0 1119 aa21.14■□□□□ 0.97
PRKCA-203ENST00000578063 DACT1Q9NYF0 836 aa21.14■□□□□ 0.97
PRKCA-203ENST00000578063 NR1I2O75469 434 aa21.13■□□□□ 0.97
PRKCA-203ENST00000578063 LETM1O95202 739 aaPredicted RBP21.13■□□□□ 0.97
PRKCA-203ENST00000578063 PTGDRQ13258 359 aa21.13■□□□□ 0.97
PRKCA-203ENST00000578063 MOB2Q70IA6 237 aa21.13■□□□□ 0.97
PRKCA-203ENST00000578063 CTDP1Q9Y5B0 961 aaPredicted RBP21.13■□□□□ 0.97
PRKCA-203ENST00000578063 USP17L15C9J2P7 530 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 USP17L13C9JLJ4 530 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 USP17L11C9JVI0 530 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 USP17L18D6R9N7 530 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 USP17L22D6RA61 530 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 USP17L17D6RBQ6 530 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 USP17L19D6RCP7 530 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 USP17L20D6RJB6 530 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 PIK3CDO00329 1044 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 LAD1O00515 517 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 CXCL11O14625 94 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 MEIS2O14770 477 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 ZBED4O75132 1171 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 ZNF445P59923 1031 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 USP17L24Q0WX57 530 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 PPIL2Q13356 520 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 LETM2Q2VYF4 491 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 LDLRAD1Q5T700 205 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 ARL6IP4Q66PJ3 421 aaKnown RBP21.12■□□□□ 0.97
PRKCA-203ENST00000578063 USP17L6PQ6QN14 398 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 CLMNQ96JQ2 1002 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 NMRK2Q9NPI5 230 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 CCPG1Q9ULG6 757 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 MYPNQ86TC9 1320 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 FAM237AA0A1B0GTK4 181 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 FOSP01100 380 aaPredicted RBP21.12■□□□□ 0.97
PRKCA-203ENST00000578063 FKBP1BP68106 108 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 RESP18Q5W5W9 173 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 SHC4Q6S5L8 630 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 CATSPERGQ6ZRH7 1159 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 ENGASEQ8NFI3 743 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 OTUD5Q96G74 571 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 NUP62CLQ9H1M0 184 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 ZNF536O15090 1300 aa21.12■□□□□ 0.97
PRKCA-203ENST00000578063 A0A0G2JLL6 359 aaPredicted RBP21.11■□□□□ 0.97
PRKCA-203ENST00000578063 TRAF5O00463 557 aa21.11■□□□□ 0.97
PRKCA-203ENST00000578063 OPLAHO14841 1288 aa21.11■□□□□ 0.97
PRKCA-203ENST00000578063 KINO60870 393 aaKnown RBP21.11■□□□□ 0.97
PRKCA-203ENST00000578063 PRRT2Q7Z6L0 340 aaPredicted RBP21.11■□□□□ 0.97
PRKCA-203ENST00000578063 CNKSR2Q8WXI2 1034 aa21.11■□□□□ 0.97
PRKCA-203ENST00000578063 CLIC6Q96NY7 704 aa21.11■□□□□ 0.97
PRKCA-203ENST00000578063 NAP1L4Q99733 375 aaKnown RBP21.11■□□□□ 0.97
PRKCA-203ENST00000578063 ANO3Q9BYT9 981 aa21.11■□□□□ 0.97
PRKCA-203ENST00000578063 ZNF408Q9H9D4 720 aa21.11■□□□□ 0.97
PRKCA-203ENST00000578063 KCNH4Q9UQ05 1017 aa21.11■□□□□ 0.97
PRKCA-203ENST00000578063 A0A1B0GVL5 298 aa21.1■□□□□ 0.97
PRKCA-203ENST00000578063 SPDYE3A6NKU9 549 aa21.1■□□□□ 0.97
PRKCA-203ENST00000578063 VWA5AO00534 786 aa21.1■□□□□ 0.97
PRKCA-203ENST00000578063 IRF6O14896 467 aa21.1■□□□□ 0.97
PRKCA-203ENST00000578063 CCNT1O60563 726 aaKnown RBP21.1■□□□□ 0.97
PRKCA-203ENST00000578063 TAL1P17542 331 aaPredicted RBP21.1■□□□□ 0.97
PRKCA-203ENST00000578063 DSG3P32926 999 aa21.1■□□□□ 0.97
PRKCA-203ENST00000578063 SNW1Q13573 536 aaKnown RBP21.1■□□□□ 0.97
PRKCA-203ENST00000578063 COG2Q14746 738 aa21.1■□□□□ 0.97
PRKCA-203ENST00000578063 PROCA1Q8NCQ7 364 aaPredicted RBP21.1■□□□□ 0.97
PRKCA-203ENST00000578063 ATG4CQ96DT6 458 aa21.1■□□□□ 0.97
PRKCA-203ENST00000578063 CLSTN2Q9H4D0 955 aa21.1■□□□□ 0.97
PRKCA-203ENST00000578063 NEMFO60524 1076 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 PFKFB1P16118 471 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 NDUFA8P51970 172 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 OAZ1P54368 228 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 FMR1NBQ8N0W7 255 aaPredicted RBP21.09■□□□□ 0.97
PRKCA-203ENST00000578063 C4orf32Q8N8J7 132 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 FAM13BQ9NYF5 915 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms