RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 LSSP48449 732 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 AMPD2Q01433 879 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 OCRLQ01968 901 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 DSG1Q02413 1049 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 KLF1Q13351 362 aaPredicted RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 RAPGEF1Q13905 1077 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 TTLL4Q14679 1199 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 PCBP2Q15366 365 aaKnown RBP eCLIP2.66□□□□□ -1.98
CHD3-217ENST00000574022 PRSS53Q2L4Q9 553 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 INAVAQ3KP66 663 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 GRAMD1BQ3KR37 738 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 NUTM2GQ5VZR2 741 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 MSL1Q68DK7 614 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 ABHD17CQ6PCB6 329 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 PGM2L1Q6PCE3 622 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 KCNT2Q6UVM3 1135 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 C20orf204Q6ZNR8 217 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 HDGFL2Q7Z4V5 671 aaPredicted RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 MTDHQ86UE4 582 aaKnown RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 MAP4K3Q8IVH8 894 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 ZC3H7AQ8IWR0 971 aaKnown RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.66□□□□□ -1.98
CHD3-217ENST00000574022 SPICE1Q8N0Z3 855 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 CPA6Q8N4T0 437 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 FIBCD1Q8N539 461 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 IGSF22Q8N9C0 903 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 MFSD2AQ8NA29 543 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 GALNT11Q8NCW6 608 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 SMC1BQ8NDV3 1235 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 SYTL5Q8TDW5 730 aaPredicted RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 PPP1R13LQ8WUF5 828 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 KIFC2Q96AC6 838 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 E2F7Q96AV8 911 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 VWCEQ96DN2 955 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 FAXDC2Q96IV6 333 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 KREMEN1Q96MU8 473 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 ZDHHC15Q96MV8 337 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 PIDD1Q9HB75 910 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 SENP2Q9HC62 589 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 VTA1Q9NP79 307 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 CABP5Q9NP86 173 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 MAN1C1Q9NR34 630 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 THG1LQ9NWX6 298 aaKnown RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 TAGLN3Q9UI15 199 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 ZBTB21Q9ULJ3 1066 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 ZNF652Q9Y2D9 606 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 GPR55Q9Y2T6 319 aaPredicted RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 SF3B6Q9Y3B4 125 aaKnown RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 MRFAP1Q9Y605 127 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 FHOD1Q9Y613 1164 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 WASHC2AQ641Q2 1341 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 FRMPD2Q68DX3 1309 aaPredicted RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 MEGF11A6BM72 1044 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 WDR64B1ANS9 1081 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 M0R082 166 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 TRAF5O00463 557 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 TM4SF5O14894 197 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 ERC2O15083 957 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 PPFIA3O75145 1194 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 LRIG2O94898 1065 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 ALBP02768 609 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 NEFMP07197 916 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 SRGAP2CP0DJJ0 459 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 PHKG2P15735 406 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 VCAM1P19320 739 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 HTR3AP46098 478 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 KPNA1P52294 538 aaPredicted RBP2.65□□□□□ -1.99
CHD3-217ENST00000574022 SESN3P58005 492 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 GPR85P60893 370 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 ERVK-21P61565 698 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 GBX1Q14549 363 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 GRM3Q14832 879 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 SAFBQ15424 915 aaKnown RBP eCLIP2.65□□□□□ -1.99
CHD3-217ENST00000574022 DUOXA2Q1HG44 320 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 DPY19L1Q2PZI1 675 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 NBPF9Q3BBW0 867 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 INO80DQ53TQ3 878 aaPredicted RBP2.65□□□□□ -1.99
CHD3-217ENST00000574022 DENND5AQ6IQ26 1287 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 ARMCX6Q7L4S7 300 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 EPM2AIP1Q7L775 607 aaPredicted RBP2.65□□□□□ -1.99
CHD3-217ENST00000574022 DYMQ7RTS9 669 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 UBE3DQ7Z6J8 389 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 MORC1Q86VD1 984 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 KREMEN2Q8NCW0 462 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 C1orf162Q8NEQ5 155 aaPredicted RBP2.65□□□□□ -1.99
CHD3-217ENST00000574022 ZNF417Q8TAU3 575 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 DCAF11Q8TEB1 546 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 CHTF18Q8WVB6 975 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 NANOS1Q8WY41 292 aaKnown RBP2.65□□□□□ -1.99
CHD3-217ENST00000574022 ISL2Q96A47 359 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 TTC17Q96AE7 1141 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 HSPBAP1Q96EW2 488 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 C1orf159Q96HA4 380 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 LRGUKQ96M69 825 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 FBXL18Q96ME1 805 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 STRBPQ96SI9 672 aaKnown RBP2.65□□□□□ -1.99
CHD3-217ENST00000574022 ZNF587Q96SQ5 575 aaPredicted RBP2.65□□□□□ -1.99
CHD3-217ENST00000574022 ZFYVE21Q9BQ24 234 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 DSCC1Q9BVC3 393 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 PHF20Q9BVI0 1012 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms