RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 WTIPA6NIX2 430 aaPredicted RBP12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 STXBP3O00186 592 aa12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 KCNH1O95259 989 aa12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 GTF2F1P35269 517 aaKnown RBP eCLIP12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 DDR2Q16832 855 aa12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 HLA-DQA1Q5Y7H0 255 aa12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 MRM1Q6IN84 353 aaKnown RBP12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 GALNT18Q6P9A2 607 aa12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 EEPD1Q7L9B9 569 aa12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 SLC6A17Q9H1V8 727 aa12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 YBX2Q9Y2T7 364 aaKnown RBP12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 ARHGEF11O15085 1522 aa12.66□□□□□ -0.38
NIFKP4-201ENST00000567275 NOTOA8MTQ0 251 aa12.65□□□□□ -0.38
NIFKP4-201ENST00000567275 AURKAO14965 403 aa12.65□□□□□ -0.38
NIFKP4-201ENST00000567275 GALK1P51570 392 aa12.65□□□□□ -0.38
NIFKP4-201ENST00000567275 HSF5Q4G112 596 aaPredicted RBP12.65□□□□□ -0.38
NIFKP4-201ENST00000567275 OGFOD2Q6N063 350 aa12.65□□□□□ -0.38
NIFKP4-201ENST00000567275 NLRX1Q86UT6 975 aa12.65□□□□□ -0.38
NIFKP4-201ENST00000567275 JAMLQ86YT9 394 aa12.65□□□□□ -0.38
NIFKP4-201ENST00000567275 SIRT2Q8IXJ6 389 aa12.65□□□□□ -0.38
NIFKP4-201ENST00000567275 TMEM52Q8NDY8 209 aa12.65□□□□□ -0.38
NIFKP4-201ENST00000567275 MCMBPQ9BTE3 642 aa12.65□□□□□ -0.38
NIFKP4-201ENST00000567275 BACE2Q9Y5Z0 518 aa12.65□□□□□ -0.38
NIFKP4-201ENST00000567275 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
NIFKP4-201ENST00000567275 TBC1D8O95759 1140 aa12.64□□□□□ -0.39
NIFKP4-201ENST00000567275 SEPHS1P49903 392 aa12.64□□□□□ -0.39
NIFKP4-201ENST00000567275 EEF1DP3Q658K8 133 aa12.64□□□□□ -0.39
NIFKP4-201ENST00000567275 RCSD1Q6JBY9 416 aa12.64□□□□□ -0.39
NIFKP4-201ENST00000567275 PRR23BQ6ZRT6 265 aa12.64□□□□□ -0.39
NIFKP4-201ENST00000567275 SLCO6A1Q86UG4 719 aa12.64□□□□□ -0.39
NIFKP4-201ENST00000567275 KSR1Q8IVT5 923 aa12.64□□□□□ -0.39
NIFKP4-201ENST00000567275 PTCHD1Q96NR3 888 aa12.64□□□□□ -0.39
NIFKP4-201ENST00000567275 TARBP1Q13395 1621 aaKnown RBP12.63□□□□□ -0.39
NIFKP4-201ENST00000567275 A0A1W2PQ27 194 aa12.63□□□□□ -0.39
NIFKP4-201ENST00000567275 A0A1W2PQ64 194 aa12.63□□□□□ -0.39
NIFKP4-201ENST00000567275 A0A1W2PQC6 194 aa12.63□□□□□ -0.39
NIFKP4-201ENST00000567275 A0A1W2PQD8 194 aa12.63□□□□□ -0.39
NIFKP4-201ENST00000567275 U2SURPO15042 1029 aaKnown RBP12.63□□□□□ -0.39
NIFKP4-201ENST00000567275 RAB33AQ14088 237 aa12.63□□□□□ -0.39
NIFKP4-201ENST00000567275 DIRC2Q96SL1 478 aa12.63□□□□□ -0.39
NIFKP4-201ENST00000567275 C2orf71A6NGG8 1288 aa12.62□□□□□ -0.39
NIFKP4-201ENST00000567275 TRIM59Q8IWR1 403 aa12.62□□□□□ -0.39
NIFKP4-201ENST00000567275 SHISA4Q96DD7 197 aa12.62□□□□□ -0.39
NIFKP4-201ENST00000567275 INTS4Q96HW7 963 aaKnown RBP12.62□□□□□ -0.39
NIFKP4-201ENST00000567275 JMJD8Q96S16 334 aa12.62□□□□□ -0.39
NIFKP4-201ENST00000567275 PLCD4Q9BRC7 762 aa12.62□□□□□ -0.39
NIFKP4-201ENST00000567275 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
NIFKP4-201ENST00000567275 PDE6BP35913 854 aa12.61□□□□□ -0.39
NIFKP4-201ENST00000567275 SF3A1Q15459 793 aaKnown RBP12.61□□□□□ -0.39
NIFKP4-201ENST00000567275 LGR4Q9BXB1 951 aa12.61□□□□□ -0.39
NIFKP4-201ENST00000567275 EPN3Q9H201 632 aa12.61□□□□□ -0.39
NIFKP4-201ENST00000567275 CRTAC1Q9NQ79 661 aa12.61□□□□□ -0.39
NIFKP4-201ENST00000567275 WDR97A6NE52 1622 aa12.61□□□□□ -0.39
NIFKP4-201ENST00000567275 POLA1P09884 1462 aaPredicted RBP12.6□□□□□ -0.39
NIFKP4-201ENST00000567275 AGRPO00253 132 aa12.6□□□□□ -0.39
NIFKP4-201ENST00000567275 FARP2O94887 1054 aaPredicted RBP12.6□□□□□ -0.39
NIFKP4-201ENST00000567275 ITGAVP06756 1048 aa12.6□□□□□ -0.39
NIFKP4-201ENST00000567275 CEBPAP49715 358 aaPredicted RBP12.6□□□□□ -0.39
NIFKP4-201ENST00000567275 GTF2IRD2BQ6EKJ0 949 aa12.6□□□□□ -0.39
NIFKP4-201ENST00000567275 GTF2IRD2Q86UP8 949 aa12.6□□□□□ -0.39
NIFKP4-201ENST00000567275 IRF2BP1Q8IU81 584 aa12.6□□□□□ -0.39
NIFKP4-201ENST00000567275 NUP43Q8NFH3 380 aa12.6□□□□□ -0.39
NIFKP4-201ENST00000567275 HIRIP3Q9BW71 556 aaPredicted RBP12.6□□□□□ -0.39
NIFKP4-201ENST00000567275 EPB41L4BQ9H329 900 aa12.6□□□□□ -0.39
NIFKP4-201ENST00000567275 EFEMP2O95967 443 aa12.59□□□□□ -0.39
NIFKP4-201ENST00000567275 PRKCAP17252 672 aa12.59□□□□□ -0.39
NIFKP4-201ENST00000567275 ZNF227Q86WZ6 799 aa12.59□□□□□ -0.39
NIFKP4-201ENST00000567275 MRGPRX3Q96LB0 322 aa12.59□□□□□ -0.39
NIFKP4-201ENST00000567275 DCP1AQ9NPI6 582 aaPredicted RBP12.59□□□□□ -0.39
NIFKP4-201ENST00000567275 IMPACTQ9P2X3 320 aa12.59□□□□□ -0.39
NIFKP4-201ENST00000567275 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.39
NIFKP4-201ENST00000567275 PNLIPP16233 465 aa12.58□□□□□ -0.4
NIFKP4-201ENST00000567275 ARL4AP40617 200 aa12.58□□□□□ -0.4
NIFKP4-201ENST00000567275 SCRN1Q12765 414 aa12.58□□□□□ -0.4
NIFKP4-201ENST00000567275 POU5F2Q8N7G0 328 aa12.58□□□□□ -0.4
NIFKP4-201ENST00000567275 ARMC5Q96C12 935 aa12.58□□□□□ -0.4
NIFKP4-201ENST00000567275 LAPTM5Q13571 262 aa12.57□□□□□ -0.4
NIFKP4-201ENST00000567275 KIR3DS1Q14943 382 aa12.57□□□□□ -0.4
NIFKP4-201ENST00000567275 SLC10A6Q3KNW5 377 aa12.57□□□□□ -0.4
NIFKP4-201ENST00000567275 ADGRF1Q5T601 910 aa12.57□□□□□ -0.4
NIFKP4-201ENST00000567275 BTN2A2Q8WVV5 523 aa12.57□□□□□ -0.4
NIFKP4-201ENST00000567275 PAMP19021 973 aa12.56□□□□□ -0.4
NIFKP4-201ENST00000567275 L1CAMP32004 1257 aa12.56□□□□□ -0.4
NIFKP4-201ENST00000567275 CYP4F8P98187 520 aa12.56□□□□□ -0.4
NIFKP4-201ENST00000567275 NKX2-4Q9H2Z4 354 aa12.56□□□□□ -0.4
NIFKP4-201ENST00000567275 CYP26B1Q9NR63 512 aa12.56□□□□□ -0.4
NIFKP4-201ENST00000567275 ACSL6Q9UKU0 697 aa12.56□□□□□ -0.4
NIFKP4-201ENST00000567275 SOGA1O94964 1423 aa12.55□□□□□ -0.4
NIFKP4-201ENST00000567275 TRBV23OR9-2A0A075B6M9 112 aa12.55□□□□□ -0.4
NIFKP4-201ENST00000567275 OR14I1A6ND48 311 aa12.55□□□□□ -0.4
NIFKP4-201ENST00000567275 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
NIFKP4-201ENST00000567275 FBXO15Q8NCQ5 510 aaPredicted RBP12.55□□□□□ -0.4
NIFKP4-201ENST00000567275 FAM84AQ96KN4 292 aa12.55□□□□□ -0.4
NIFKP4-201ENST00000567275 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
NIFKP4-201ENST00000567275 SLC38A3Q99624 504 aa12.55□□□□□ -0.4
NIFKP4-201ENST00000567275 KRTAP4-8Q9BYQ9 185 aa12.55□□□□□ -0.4
NIFKP4-201ENST00000567275 NPHP3-ACAD11A0A0J9YXS1 232 aa12.54□□□□□ -0.4
NIFKP4-201ENST00000567275 A0A1W2PQJ5 194 aa12.54□□□□□ -0.4
NIFKP4-201ENST00000567275 TBX1O43435 398 aa12.54□□□□□ -0.4
NIFKP4-201ENST00000567275 ZNF648Q5T619 568 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms