RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 WDR59Q6PJI9 974 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 TPTE2Q6XPS3 522 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 RASGRP4Q8TDF6 673 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 EIF3CQ99613 913 aaKnown RBP14.65□□□□□ -0.06
USB1-207ENST00000563149 DUSP9Q99956 384 aaKnown RBP14.65□□□□□ -0.06
USB1-207ENST00000563149 TUBGCP2Q9BSJ2 902 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 VIPAS39Q9H9C1 493 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 LEMD3Q9Y2U8 911 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 FLT1P17948 1338 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 ANO9A1A5B4 782 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 H3BQF6 201 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 CYTH3O43739 400 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 IPO7O95373 1038 aaKnown RBP14.65□□□□□ -0.06
USB1-207ENST00000563149 OR52Z1P0C646 297 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 RHOXF2BP0C7M4 288 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 HERVK_113P62684 666 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 VSNL1P62760 191 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 ST5P78524 1137 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 NONOQ15233 471 aaKnown RBP eCLIP14.65□□□□□ -0.06
USB1-207ENST00000563149 MAP9Q49MG5 647 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 CCDC122Q5T0U0 273 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 BICDL1Q6ZP65 573 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 HEATR3Q7Z4Q2 680 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 NBPF5PQ86XG9 351 aaPredicted RBP14.65□□□□□ -0.06
USB1-207ENST00000563149 CSGALNACT2Q8N6G5 542 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 ERGIC2Q96RQ1 377 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 RHOXF2Q9BQY4 288 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 C6orf50Q9HD87 102 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 SAR1BQ9Y6B6 198 aa14.65□□□□□ -0.06
USB1-207ENST00000563149 TARSL2A2RTX5 802 aaKnown RBP14.64□□□□□ -0.07
USB1-207ENST00000563149 RPS6KA4O75676 772 aa14.64□□□□□ -0.07
USB1-207ENST00000563149 USP14P54578 494 aa14.64□□□□□ -0.07
USB1-207ENST00000563149 PDE4DQ08499 809 aa14.64□□□□□ -0.07
USB1-207ENST00000563149 TBC1D8BQ0IIM8 1120 aa14.64□□□□□ -0.07
USB1-207ENST00000563149 CNNM4Q6P4Q7 775 aa14.64□□□□□ -0.07
USB1-207ENST00000563149 ZSCAN29Q8IWY8 852 aaPredicted RBP14.64□□□□□ -0.07
USB1-207ENST00000563149 FAM71BQ8TC56 605 aa14.64□□□□□ -0.07
USB1-207ENST00000563149 TMEM47Q9BQJ4 181 aa14.64□□□□□ -0.07
USB1-207ENST00000563149 TSGA10Q9BZW7 698 aa14.64□□□□□ -0.07
USB1-207ENST00000563149 TRIM9Q9C026 710 aa14.64□□□□□ -0.07
USB1-207ENST00000563149 PDE11AQ9HCR9 933 aa14.64□□□□□ -0.07
USB1-207ENST00000563149 CWC15Q9P013 229 aaKnown RBP14.64□□□□□ -0.07
USB1-207ENST00000563149 MYH1P12882 1939 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 NAV1Q8NEY1 1877 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 ABCB11O95342 1321 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 PP2D1A8MPX8 630 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 hCG_1984214I3L0E3 225 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 PES1O00541 588 aaKnown RBP14.63□□□□□ -0.07
USB1-207ENST00000563149 PLCG1P19174 1290 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 TM4SF1P30408 202 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 MCM6Q14566 821 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 CASP8Q14790 479 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 SLC35G1Q2M3R5 365 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 C15orf52Q6ZUT6 534 aaKnown RBP14.63□□□□□ -0.07
USB1-207ENST00000563149 KIAA1328Q86T90 577 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 ZNF713Q8N859 430 aaPredicted RBP14.63□□□□□ -0.07
USB1-207ENST00000563149 JAKMIP2Q96AA8 810 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 DYNLL2Q96FJ2 89 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 MED4Q9NPJ6 270 aa14.63□□□□□ -0.07
USB1-207ENST00000563149 ESYT2A0FGR8 921 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 B4DLN1 442 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 KLRF2D3W0D1 207 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 KCNQ2O43526 872 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 TRIM21P19474 475 aaKnown RBP14.62□□□□□ -0.07
USB1-207ENST00000563149 HSP90B2PQ58FF3 399 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 FKBP15Q5T1M5 1219 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 NEK8Q86SG6 692 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 NEK11Q8NG66 645 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 GOLGA5Q8TBA6 731 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 SH3RF3Q8TEJ3 882 aaPredicted RBP14.62□□□□□ -0.07
USB1-207ENST00000563149 CALML4Q96GE6 196 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 CNOT6LQ96LI5 555 aaKnown RBP14.62□□□□□ -0.07
USB1-207ENST00000563149 PURBQ96QR8 312 aaKnown RBP14.62□□□□□ -0.07
USB1-207ENST00000563149 USP17L3A6NCW0 530 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 USP17L4A6NCW7 530 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 TULP2O00295 520 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 FGFR1OPO95684 399 aaKnown RBP14.62□□□□□ -0.07
USB1-207ENST00000563149 RASA1P20936 1047 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 HNRNPH3P31942 346 aaKnown RBP14.62□□□□□ -0.07
USB1-207ENST00000563149 MTIF2P46199 727 aaKnown RBP14.62□□□□□ -0.07
USB1-207ENST00000563149 NAPAP54920 295 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 TXNRD1Q16881 649 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 SOGA3Q5TF21 947 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 ANKRD40Q6AI12 368 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 NCAPH2Q6IBW4 605 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 IQCEQ6IPM2 695 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 USP17L1Q7RTZ2 530 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 TXNRD3Q86VQ6 643 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 NOA1Q8NC60 698 aaKnown RBP14.62□□□□□ -0.07
USB1-207ENST00000563149 NOC4LQ9BVI4 516 aaKnown RBP14.62□□□□□ -0.07
USB1-207ENST00000563149 TSPYL1Q9H0U9 437 aa14.62□□□□□ -0.07
USB1-207ENST00000563149 NHEJ1Q9H9Q4 299 aaPredicted RBP14.62□□□□□ -0.07
USB1-207ENST00000563149 BAZ2BQ9UIF8 2168 aaKnown RBP14.61□□□□□ -0.07
USB1-207ENST00000563149 PVALEFA0A1B0GWK0 134 aa14.61□□□□□ -0.07
USB1-207ENST00000563149 SMCO2A6NFE2 343 aa14.61□□□□□ -0.07
USB1-207ENST00000563149 CCNT1O60563 726 aaKnown RBP14.61□□□□□ -0.07
USB1-207ENST00000563149 ZPR1O75312 459 aa14.61□□□□□ -0.07
USB1-207ENST00000563149 ASIC1P78348 528 aa14.61□□□□□ -0.07
USB1-207ENST00000563149 FOXR2Q6PJQ5 311 aa14.61□□□□□ -0.07
USB1-207ENST00000563149 NEDD1Q8NHV4 660 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms