RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 TRAF5O00463 557 aa16.29■□□□□ 0.2
CNN2-204ENST00000562075 TAL1P17542 331 aaPredicted RBP16.29■□□□□ 0.2
CNN2-204ENST00000562075 CLK2P49760 499 aaKnown RBP16.29■□□□□ 0.2
CNN2-204ENST00000562075 ZSCAN23Q3MJ62 389 aa16.29■□□□□ 0.2
CNN2-204ENST00000562075 SH3D19Q5HYK7 790 aa16.29■□□□□ 0.2
CNN2-204ENST00000562075 AXDND1Q5T1B0 1012 aaPredicted RBP16.29■□□□□ 0.2
CNN2-204ENST00000562075 MCTP2Q6DN12 878 aa16.29■□□□□ 0.2
CNN2-204ENST00000562075 NEK8Q86SG6 692 aa16.29■□□□□ 0.2
CNN2-204ENST00000562075 TBCKQ8TEA7 893 aa16.29■□□□□ 0.2
CNN2-204ENST00000562075 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
CNN2-204ENST00000562075 CLMNQ96JQ2 1002 aa16.29■□□□□ 0.2
CNN2-204ENST00000562075 GOLPH3LQ9H4A5 285 aa16.29■□□□□ 0.2
CNN2-204ENST00000562075 ZNF408Q9H9D4 720 aa16.29■□□□□ 0.2
CNN2-204ENST00000562075 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
CNN2-204ENST00000562075 FBXO2Q9UK22 296 aaPredicted RBP16.29■□□□□ 0.2
CNN2-204ENST00000562075 SPDYE5A6NIY4 337 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 USP17L15C9J2P7 530 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 USP17L13C9JLJ4 530 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 USP17L11C9JVI0 530 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 USP17L18D6R9N7 530 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 USP17L22D6RA61 530 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 USP17L17D6RBQ6 530 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 USP17L19D6RCP7 530 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 USP17L20D6RJB6 530 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 ZBED4O75132 1171 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 PTPREP23469 700 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 ATP2C1P98194 919 aaPredicted RBP16.28■□□□□ 0.2
CNN2-204ENST00000562075 PPATQ06203 517 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 USP17L24Q0WX57 530 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 PTGDRQ13258 359 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 GSE1Q14687 1217 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 USP17L6PQ6QN14 398 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 ZNF526Q8TF50 670 aaPredicted RBP16.28■□□□□ 0.2
CNN2-204ENST00000562075 OTUD5Q96G74 571 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 NMRK2Q9NPI5 230 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 DACT1Q9NYF0 836 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 CCPG1Q9ULG6 757 aa16.28■□□□□ 0.2
CNN2-204ENST00000562075 MRPL11Q9Y3B7 192 aaKnown RBP16.28■□□□□ 0.2
CNN2-204ENST00000562075 NR1I2O75469 434 aa16.27■□□□□ 0.2
CNN2-204ENST00000562075 ICAM1P05362 532 aa16.27■□□□□ 0.2
CNN2-204ENST00000562075 FDX1P10109 184 aa16.27■□□□□ 0.2
CNN2-204ENST00000562075 CMA1P23946 247 aa16.27■□□□□ 0.2
CNN2-204ENST00000562075 FAM160A1Q05DH4 1040 aa16.27■□□□□ 0.2
CNN2-204ENST00000562075 AP3B2Q13367 1082 aa16.27■□□□□ 0.2
CNN2-204ENST00000562075 LETM2Q2VYF4 491 aa16.27■□□□□ 0.2
CNN2-204ENST00000562075 TEX2Q8IWB9 1127 aa16.27■□□□□ 0.2
CNN2-204ENST00000562075 FERMT2Q96AC1 680 aa16.27■□□□□ 0.2
CNN2-204ENST00000562075 SLC38A10Q9HBR0 1119 aa16.27■□□□□ 0.2
CNN2-204ENST00000562075 PNMA2Q9UL42 364 aa16.27■□□□□ 0.2
CNN2-204ENST00000562075 SRPRBQ9Y5M8 271 aaKnown RBP16.27■□□□□ 0.2
CNN2-204ENST00000562075 UTRNP46939 3433 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 A0A1B0GVL5 298 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 CXCL11O14625 94 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 MEIS2O14770 477 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 CCNT1O60563 726 aaKnown RBP16.26■□□□□ 0.19
CNN2-204ENST00000562075 PPIL2Q13356 520 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 ORC2Q13416 577 aaPredicted RBP16.26■□□□□ 0.19
CNN2-204ENST00000562075 LDLRAD1Q5T700 205 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 GADL1Q6ZQY3 521 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 ATG4CQ96DT6 458 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 AGBL1Q96MI9 1066 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 CLIC6Q96NY7 704 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 ANO3Q9BYT9 981 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 NUP62CLQ9H1M0 184 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 MRVI1Q9Y6F6 885 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 PARP14Q460N5 1801 aa16.26■□□□□ 0.19
CNN2-204ENST00000562075 PTPRFP10586 1907 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 ZNF536O15090 1300 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 A0A0G2JLL6 359 aaPredicted RBP16.25■□□□□ 0.19
CNN2-204ENST00000562075 SPDYE3A6NKU9 549 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 VWA5AO00534 786 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 OPLAHO14841 1288 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 KINO60870 393 aaKnown RBP16.25■□□□□ 0.19
CNN2-204ENST00000562075 LETM1O95202 739 aaPredicted RBP16.25■□□□□ 0.19
CNN2-204ENST00000562075 FOSP01100 380 aaPredicted RBP16.25■□□□□ 0.19
CNN2-204ENST00000562075 PFKFB1P16118 471 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 DSG3P32926 999 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 ZNF445P59923 1031 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 FMR1Q06787 632 aaKnown RBP eCLIP16.25■□□□□ 0.19
CNN2-204ENST00000562075 COG2Q14746 738 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 RESP18Q5W5W9 173 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 SHC4Q6S5L8 630 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 CATSPERGQ6ZRH7 1159 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 PRRT2Q7Z6L0 340 aaPredicted RBP16.25■□□□□ 0.19
CNN2-204ENST00000562075 CPXCR1Q8N123 301 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 ZNF579Q8NAF0 562 aaKnown RBP16.25■□□□□ 0.19
CNN2-204ENST00000562075 OPTNQ96CV9 577 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 RAVER2Q9HCJ3 691 aaKnown RBP16.25■□□□□ 0.19
CNN2-204ENST00000562075 FAM13BQ9NYF5 915 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 LOC285556D6RIA3 1793 aa16.25■□□□□ 0.19
CNN2-204ENST00000562075 SYCE3A1L190 88 aa16.24■□□□□ 0.19
CNN2-204ENST00000562075 UNCXA6NJT0 531 aa16.24■□□□□ 0.19
CNN2-204ENST00000562075 GCOM1H8Y6P7 765 aaPredicted RBP16.24■□□□□ 0.19
CNN2-204ENST00000562075 PIK3CDO00329 1044 aa16.24■□□□□ 0.19
CNN2-204ENST00000562075 LAD1O00515 517 aa16.24■□□□□ 0.19
CNN2-204ENST00000562075 IRF6O14896 467 aa16.24■□□□□ 0.19
CNN2-204ENST00000562075 NEMFO60524 1076 aa16.24■□□□□ 0.19
CNN2-204ENST00000562075 CFBP00751 764 aa16.24■□□□□ 0.19
CNN2-204ENST00000562075 POLR2MP0CAP2 368 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms