RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 A0A0G2JMZ2 1700 aa13.96□□□□□ -0.18
HERC1-205ENST00000559886 SPDYE16A6NNV3 312 aaPredicted RBP13.95□□□□□ -0.18
HERC1-205ENST00000559886 OPLAHO14841 1288 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 TOMM70O94826 608 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 TAL1P17542 331 aaPredicted RBP13.95□□□□□ -0.18
HERC1-205ENST00000559886 CLK2P49760 499 aaKnown RBP13.95□□□□□ -0.18
HERC1-205ENST00000559886 CSPP1Q1MSJ5 1256 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 SPRYD7Q5W111 196 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 KRT25Q7Z3Z0 450 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 SAPCD2Q86UD0 394 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 TEX2Q8IWB9 1127 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 LEO1Q8WVC0 666 aaPredicted RBP13.95□□□□□ -0.18
HERC1-205ENST00000559886 MS4A4AQ96JQ5 239 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 AGBL1Q96MI9 1066 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 LMBRD1Q9NUN5 540 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 CCPG1Q9ULG6 757 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 ABCB11O95342 1321 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 CCDC194A0A1B0GVG4 234 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 PRPF40AO75400 957 aaKnown RBP13.95□□□□□ -0.18
HERC1-205ENST00000559886 NASPP49321 788 aaPredicted RBP13.95□□□□□ -0.18
HERC1-205ENST00000559886 GTF2A2P52657 109 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 OAZ1P54368 228 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 CEBPZQ03701 1054 aaKnown RBP13.95□□□□□ -0.18
HERC1-205ENST00000559886 ANO1Q5XXA6 986 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 GPAT2Q6NUI2 795 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 SPATA32Q96LK8 384 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 RAVER2Q9HCJ3 691 aaKnown RBP13.95□□□□□ -0.18
HERC1-205ENST00000559886 BIN2Q9UBW5 565 aaPredicted RBP13.95□□□□□ -0.18
HERC1-205ENST00000559886 RCOR1Q9UKL0 485 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 MRPL11Q9Y3B7 192 aaKnown RBP13.95□□□□□ -0.18
HERC1-205ENST00000559886 CTDP1Q9Y5B0 961 aaPredicted RBP13.95□□□□□ -0.18
HERC1-205ENST00000559886 CLIC4Q9Y696 253 aa13.95□□□□□ -0.18
HERC1-205ENST00000559886 ELP1O95163 1332 aa13.94□□□□□ -0.18
HERC1-205ENST00000559886 MYH7BA7E2Y1 1941 aa13.94□□□□□ -0.18
HERC1-205ENST00000559886 CETPP11597 493 aa13.94□□□□□ -0.18
HERC1-205ENST00000559886 TRAPPC10P48553 1259 aa13.94□□□□□ -0.18
HERC1-205ENST00000559886 CPXCR1Q8N123 301 aa13.94□□□□□ -0.18
HERC1-205ENST00000559886 NOL7Q9UMY1 257 aaKnown RBP13.94□□□□□ -0.18
HERC1-205ENST00000559886 RBBP6Q7Z6E9 1792 aaKnown RBP13.94□□□□□ -0.18
HERC1-205ENST00000559886 MEIS2O14770 477 aa13.93□□□□□ -0.18
HERC1-205ENST00000559886 ATP2A1O14983 1001 aa13.93□□□□□ -0.18
HERC1-205ENST00000559886 YEATS4O95619 227 aa13.93□□□□□ -0.18
HERC1-205ENST00000559886 PTMSP20962 102 aa13.93□□□□□ -0.18
HERC1-205ENST00000559886 PABPC4Q13310 644 aaKnown RBP eCLIP13.93□□□□□ -0.18
HERC1-205ENST00000559886 UBE2SQ16763 222 aa13.93□□□□□ -0.18
HERC1-205ENST00000559886 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
HERC1-205ENST00000559886 ASCC2Q9H1I8 757 aaPredicted RBP13.93□□□□□ -0.18
HERC1-205ENST00000559886 TMEM260Q9NX78 707 aa13.93□□□□□ -0.18
HERC1-205ENST00000559886 ZNF214Q9UL59 606 aaPredicted RBP13.93□□□□□ -0.18
HERC1-205ENST00000559886 PIK3CDO00329 1044 aa13.93□□□□□ -0.18
HERC1-205ENST00000559886 IRX3P78415 501 aaPredicted RBP13.93□□□□□ -0.18
HERC1-205ENST00000559886 NONOQ15233 471 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■■■□□ 15.3
HERC1-205ENST00000559886 SF3A1Q15459 793 aaKnown RBP13.93□□□□□ -0.18
HERC1-205ENST00000559886 USP17L6PQ6QN14 398 aa13.93□□□□□ -0.18
HERC1-205ENST00000559886 LBX2Q6XYB7 198 aa13.93□□□□□ -0.18
HERC1-205ENST00000559886 LINC00301Q8NCQ3 95 aa13.93□□□□□ -0.18
HERC1-205ENST00000559886 P2RX7Q99572 595 aaKnown RBP13.93□□□□□ -0.18
HERC1-205ENST00000559886 NBR1Q14596 966 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 TMEM132BQ14DG7 1078 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 MCTP2Q6DN12 878 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 POTEEQ6S8J3 1075 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 MB21D1Q8N884 522 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 PCDHB6Q9Y5E3 794 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 TLL2Q9Y6L7 1015 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 CCL15-CCL14A0A0B4J2E2 113 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 ZNF157P51786 506 aaPredicted RBP13.92□□□□□ -0.18
HERC1-205ENST00000559886 MKRN3Q13064 507 aaKnown RBP13.92□□□□□ -0.18
HERC1-205ENST00000559886 SLC39A14Q15043 492 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 PTPAQ15257 358 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 CCL15Q16663 113 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 CLEC4DQ8WXI8 215 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 SLC45A1Q9Y2W3 748 aa13.92□□□□□ -0.18
HERC1-205ENST00000559886 WNT7AO00755 349 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 ALAS1P13196 640 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 ATP2B1P20020 1258 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 OSBPP22059 807 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 YY1P25490 414 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 HERVK_113P62684 666 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 FSTL1Q12841 308 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 AP3B2Q13367 1082 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 STK38Q15208 465 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 INF2Q27J81 1249 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 TTC38Q5R3I4 469 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 RGMBQ6NW40 437 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 RASAL3Q86YV0 1011 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 BRI3BPQ8WY22 251 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.91□□□□□ -0.18
HERC1-205ENST00000559886 GHRHRQ02643 423 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 ZNF784Q8NCA9 323 aaPredicted RBP13.91□□□□□ -0.18
HERC1-205ENST00000559886 KCNG4Q8TDN1 519 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 TBCKQ8TEA7 893 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 TEX13BQ9BXU2 312 aa13.91□□□□□ -0.18
HERC1-205ENST00000559886 SPTLC2O15270 562 aa13.9□□□□□ -0.18
HERC1-205ENST00000559886 GADD45BO75293 160 aaPredicted RBP13.9□□□□□ -0.18
HERC1-205ENST00000559886 FOSP01100 380 aaPredicted RBP13.9□□□□□ -0.18
HERC1-205ENST00000559886 SNRNP48Q6IEG0 339 aaKnown RBP13.9□□□□□ -0.18
HERC1-205ENST00000559886 ANKRD23Q86SG2 305 aa13.9□□□□□ -0.18
HERC1-205ENST00000559886 TBC1D5Q92609 795 aa13.9□□□□□ -0.18
HERC1-205ENST00000559886 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
HERC1-205ENST00000559886 RIPK3Q9Y572 518 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms