RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 A0A1W2PQ45 241 aaPredicted RBP6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 A0A1W2PQY0 241 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 OR14I1A6ND48 311 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 WTIPA6NIX2 430 aaPredicted RBP6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 PEX10O60683 326 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 SDHBP21912 280 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 DLG4P78352 724 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 TNNI3KQ59H18 835 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 LCE4AQ5TA78 99 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 CIAPIN1Q6FI81 312 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 GALNT18Q6P9A2 607 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 C6orf15Q6UXA7 325 aaPredicted RBP6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 GMLQ99445 158 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 SGPP1Q9BX95 441 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 KRTAP4-2Q9BYR5 136 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 TAF6LQ9Y6J9 622 aa6.69□□□□□ -1.34
CTDSPL2-207ENST00000559738 TEX51A0A1B0GUA7 166 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 STXBP3O00186 592 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 AURKAO14965 403 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 NUAK1O60285 661 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 PNLIPP16233 465 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 PRKCAP17252 672 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 NCAPHQ15003 741 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 DPY19L1Q2PZI1 675 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 LARP1BQ659C4 914 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 NAT16Q8N8M0 369 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 PTCHD1Q96NR3 888 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 LGR4Q9BXB1 951 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 IMPACTQ9P2X3 320 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 ACSL6Q9UKU0 697 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 SUGT1Q9Y2Z0 365 aa6.68□□□□□ -1.34
CTDSPL2-207ENST00000559738 MSL3P1P0C860 447 aa6.67□□□□□ -1.34
CTDSPL2-207ENST00000559738 GRB10Q13322 594 aa6.67□□□□□ -1.34
CTDSPL2-207ENST00000559738 MRM1Q6IN84 353 aaKnown RBP6.67□□□□□ -1.34
CTDSPL2-207ENST00000559738 RCSD1Q6JBY9 416 aa6.67□□□□□ -1.34
CTDSPL2-207ENST00000559738 SIAH1Q8IUQ4 282 aa6.67□□□□□ -1.34
CTDSPL2-207ENST00000559738 FAM178BQ8IXR5 827 aa6.67□□□□□ -1.34
CTDSPL2-207ENST00000559738 NUP43Q8NFH3 380 aa6.67□□□□□ -1.34
CTDSPL2-207ENST00000559738 APBA2Q99767 749 aa6.67□□□□□ -1.34
CTDSPL2-207ENST00000559738 GCM1Q9NP62 436 aa6.67□□□□□ -1.34
CTDSPL2-207ENST00000559738 AKT3Q9Y243 479 aa6.67□□□□□ -1.34
CTDSPL2-207ENST00000559738 EMC9Q9Y3B6 208 aa6.67□□□□□ -1.34
CTDSPL2-207ENST00000559738 ERVFRD-1P60508 538 aa6.66□□□□□ -1.34
CTDSPL2-207ENST00000559738 MVKQ03426 396 aa6.66□□□□□ -1.34
CTDSPL2-207ENST00000559738 HLA-DQA1Q5Y7H0 255 aa6.66□□□□□ -1.34
CTDSPL2-207ENST00000559738 CYP2R1Q6VVX0 501 aa6.66□□□□□ -1.34
CTDSPL2-207ENST00000559738 IRF2BPLQ9H1B7 796 aa6.66□□□□□ -1.34
CTDSPL2-207ENST00000559738 ZNF143P52747 638 aaPredicted RBP6.65□□□□□ -1.34
CTDSPL2-207ENST00000559738 SRSF3P84103 164 aaKnown RBP6.65□□□□□ -1.34
CTDSPL2-207ENST00000559738 CYP4F8P98187 520 aa6.65□□□□□ -1.34
CTDSPL2-207ENST00000559738 AMPD2Q01433 879 aa6.65□□□□□ -1.34
CTDSPL2-207ENST00000559738 EEF1DP3Q658K8 133 aa6.65□□□□□ -1.34
CTDSPL2-207ENST00000559738 CELF2-AS1Q8N7Q2 184 aa6.65□□□□□ -1.34
CTDSPL2-207ENST00000559738 BVESQ8NE79 360 aa6.65□□□□□ -1.34
CTDSPL2-207ENST00000559738 HNRNPLLQ8WVV9 542 aaKnown RBP6.65□□□□□ -1.34
CTDSPL2-207ENST00000559738 MRGPRX3Q96LB0 322 aa6.65□□□□□ -1.34
CTDSPL2-207ENST00000559738 BACE2Q9Y5Z0 518 aa6.65□□□□□ -1.34
CTDSPL2-207ENST00000559738 C2orf71A6NGG8 1288 aa6.64□□□□□ -1.35
CTDSPL2-207ENST00000559738 KCNH1O95259 989 aa6.64□□□□□ -1.35
CTDSPL2-207ENST00000559738 LAPTM5Q13571 262 aa6.64□□□□□ -1.35
CTDSPL2-207ENST00000559738 FXNQ16595 210 aa6.64□□□□□ -1.35
CTDSPL2-207ENST00000559738 AMIGO3Q86WK7 504 aa6.64□□□□□ -1.35
CTDSPL2-207ENST00000559738 JAMLQ86YT9 394 aa6.64□□□□□ -1.35
CTDSPL2-207ENST00000559738 TNFRSF12AQ9NP84 129 aa6.64□□□□□ -1.35
CTDSPL2-207ENST00000559738 MBD1Q9UIS9 605 aaPredicted RBP6.64□□□□□ -1.35
CTDSPL2-207ENST00000559738 CNOT6Q9ULM6 557 aaKnown RBP6.64□□□□□ -1.35
CTDSPL2-207ENST00000559738 HRKO00198 91 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 TBX1O43435 398 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 SUSD5O60279 629 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 DDAH1O94760 285 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 GJB6O95452 261 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 TBC1D8O95759 1140 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 NAT2P11245 290 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 VIPR1P32241 457 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 ARL4AP40617 200 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 ZC3H6P61129 1189 aaKnown RBP6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 YBX1P67809 324 aaKnown RBP6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 CYP4F3Q08477 520 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 NAALADL2Q58DX5 795 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 ANKS3Q6ZW76 656 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 TRIM59Q8IWR1 403 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 COPS5Q92905 334 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 PPP1R14AQ96A00 147 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 SIRT5Q9NXA8 310 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 KLHL14Q9P2G3 628 aa6.63□□□□□ -1.35
CTDSPL2-207ENST00000559738 KLF4O43474 513 aa6.62□□□□□ -1.35
CTDSPL2-207ENST00000559738 SEPHS1P49903 392 aa6.62□□□□□ -1.35
CTDSPL2-207ENST00000559738 EPHB3P54753 998 aa6.62□□□□□ -1.35
CTDSPL2-207ENST00000559738 SSPNQ14714 243 aa6.62□□□□□ -1.35
CTDSPL2-207ENST00000559738 GTF2IRD2BQ6EKJ0 949 aa6.62□□□□□ -1.35
CTDSPL2-207ENST00000559738 GTF2IRD2Q86UP8 949 aa6.62□□□□□ -1.35
CTDSPL2-207ENST00000559738 GPRC5CQ9NQ84 441 aa6.62□□□□□ -1.35
CTDSPL2-207ENST00000559738 KCTD3Q9Y597 815 aa6.62□□□□□ -1.35
CTDSPL2-207ENST00000559738 A0A1W2PQ27 194 aa6.61□□□□□ -1.35
CTDSPL2-207ENST00000559738 A0A1W2PQ64 194 aa6.61□□□□□ -1.35
CTDSPL2-207ENST00000559738 A0A1W2PQC6 194 aa6.61□□□□□ -1.35
CTDSPL2-207ENST00000559738 A0A1W2PQD8 194 aa6.61□□□□□ -1.35
CTDSPL2-207ENST00000559738 NUDT19A8MXV4 375 aa6.61□□□□□ -1.35
CTDSPL2-207ENST00000559738 NOP56O00567 594 aaKnown RBP6.61□□□□□ -1.35
CTDSPL2-207ENST00000559738 PPP1R11O60927 126 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms