RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 COG1Q8WTW3 980 aa5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 LMBR1Q8WVP7 490 aa5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 MEIS3Q99687 375 aa5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 TMX4Q9H1E5 349 aaPredicted RBP5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 PLEKHA4Q9H4M7 779 aa5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 ACTR5Q9H9F9 607 aaPredicted RBP5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 SLC40A1Q9NP59 571 aa5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 MARK1Q9P0L2 795 aa5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 TUBE1Q9UJT0 475 aa5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 TPCN1Q9ULQ1 816 aa5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 USP20Q9Y2K6 914 aa5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 KCNMB2Q9Y691 235 aa5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 SH3TC1Q8TE82 1336 aa5.98□□□□□ -1.45
LSM3P2-201ENST00000551246 ANKRD26Q9UPS8 1709 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 ARHGEF10O15013 1369 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 DEPDC5O75140 1603 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 CBFA2T2O43439 604 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 WIPF1O43516 503 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 FZD6O60353 706 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 WDHD1O75717 1129 aaPredicted RBP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 SMNDC1O75940 238 aaKnown RBP eCLIP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 FAM13AO94988 1023 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 HMGB1P09429 215 aaKnown RBP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 MX2P20592 715 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 ALDH1B1P30837 517 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 GCLCP48506 637 aaPredicted RBP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 CLNS1AP54105 237 aaKnown RBP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 NAP1L1P55209 391 aaKnown RBP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 XRCC4Q13426 336 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 DCTN1Q14203 1278 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 SLMAPQ14BN4 828 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 NAA16Q6N069 864 aaPredicted RBP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 MIS18BP1Q6P0N0 1132 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 CRELD2Q6UXH1 353 aaPredicted RBP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 APLFQ8IW19 511 aaPredicted RBP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 FUKQ8N0W3 1084 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 TC2NQ8N9U0 490 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 SMARCC2Q8TAQ2 1214 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 FAM76AQ8TAV0 307 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 RUBCNQ92622 972 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 DPF2Q92785 391 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 ACSBG1Q96GR2 724 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 CNTNAP3BQ96NU0 1288 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 SLC30A3Q99726 388 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 CNTNAP3Q9BZ76 1288 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 MRPL44Q9H9J2 332 aaKnown RBP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 CFAP45Q9UL16 551 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 TPX2Q9ULW0 747 aaKnown RBP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 KCNH4Q9UQ05 1017 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 RTCBQ9Y3I0 505 aaKnown RBP5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 TULP4Q9NRJ4 1543 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 ANKARQ7Z5J8 1434 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 ADGRF5Q8IZF2 1346 aa5.97□□□□□ -1.45
LSM3P2-201ENST00000551246 ATP7BP35670 1465 aa5.96□□□□□ -1.45
LSM3P2-201ENST00000551246 VPS37CA5D8V6 355 aaPredicted RBP5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 ZSCAN9O15535 394 aaPredicted RBP5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 DIAPH1O60610 1272 aaKnown RBP5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 CAND2O75155 1236 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 ZNF202O95125 648 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 EGFRP00533 1210 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 MCM3P25205 808 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 RDXP35241 583 aaKnown RBP5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 CCNG1P51959 295 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 IFFO1Q0D2I5 559 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 SNCBQ16143 134 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 ADCK5Q3MIX3 580 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 AMOTQ4VCS5 1084 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 CEP85LQ5SZL2 805 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 MTHFD1LQ6UB35 978 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 CCNI2Q6ZMN8 369 aaPredicted RBP5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 TOGARAM2Q6ZUX3 1019 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 KIAA1328Q86T90 577 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 TRIM74Q86UV6 250 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 TRIM73Q86UV7 250 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 GLYCTKQ8IVS8 523 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 ELOA2Q8IYF1 753 aaPredicted RBP5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 RGL4Q8IZJ4 473 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 PARD3BQ8TEW8 1205 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 AENQ8WTP8 325 aaKnown RBP5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 TBC1D5Q92609 795 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 SMARCC1Q92922 1105 aaPredicted RBP5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 SAAL1Q96ER3 474 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 THOC1Q96FV9 657 aaKnown RBP5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 OSBPL9Q96SU4 736 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 CAPS2Q9BXY5 557 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 LRRCC1Q9C099 1032 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 EHD4Q9H223 541 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 C14orf93Q9H972 538 aaKnown RBP5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 KIF9Q9HAQ2 790 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 SLC39A2Q9NP94 309 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 KCNMB3Q9NPA1 279 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 IRAK4Q9NWZ3 460 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 LMCD1Q9NZU5 365 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 MYO1AQ9UBC5 1043 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 KLF15Q9UIH9 416 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 PCDHGC5Q9Y5F6 944 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 CYP46A1Q9Y6A2 500 aa5.96□□□□□ -1.46
LSM3P2-201ENST00000551246 TET3O43151 1660 aa5.95□□□□□ -1.46
LSM3P2-201ENST00000551246 SHTN1A0MZ66 631 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms