RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 GRXCR1A8MXD5 290 aa18.28■□□□□ 0.52
RAB5C-205ENST00000550013 ACRP10323 421 aa18.28■□□□□ 0.52
RAB5C-205ENST00000550013 NKX3-2P78367 333 aa18.28■□□□□ 0.52
RAB5C-205ENST00000550013 MUM1L1Q5H9M0 696 aa18.28■□□□□ 0.52
RAB5C-205ENST00000550013 TIFAQ96CG3 184 aa18.28■□□□□ 0.52
RAB5C-205ENST00000550013 ZNF576Q9H609 170 aa18.28■□□□□ 0.52
RAB5C-205ENST00000550013 IL17RBQ9NRM6 502 aa18.28■□□□□ 0.52
RAB5C-205ENST00000550013 STX8Q9UNK0 236 aa18.28■□□□□ 0.52
RAB5C-205ENST00000550013 TSPY2A6NKD2 308 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 CYP2C18P33260 490 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 PBX2P40425 430 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 TKFCQ3LXA3 575 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 RASIP1Q5U651 963 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 RCSD1Q6JBY9 416 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 CXCL17Q6UXB2 119 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 TLK2Q86UE8 772 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 USP38Q8NB14 1042 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 PDGFCQ9NRA1 345 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 PRR12Q9ULL5 1215 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 MTMR7Q9Y216 660 aa18.27■□□□□ 0.52
RAB5C-205ENST00000550013 GNEQ9Y223 722 aaKnown RBP18.27■□□□□ 0.52
RAB5C-205ENST00000550013 ASB14A6NK59 587 aa18.26■□□□□ 0.51
RAB5C-205ENST00000550013 TLR3O15455 904 aaKnown RBP18.26■□□□□ 0.51
RAB5C-205ENST00000550013 PLA2G6O60733 806 aa18.26■□□□□ 0.51
RAB5C-205ENST00000550013 CD4P01730 458 aa18.26■□□□□ 0.51
RAB5C-205ENST00000550013 SMPD1P17405 629 aa18.26■□□□□ 0.51
RAB5C-205ENST00000550013 MX1P20591 662 aa18.26■□□□□ 0.51
RAB5C-205ENST00000550013 TMEM63BQ5T3F8 832 aa18.26■□□□□ 0.51
RAB5C-205ENST00000550013 ZNF365Q70YC5 407 aa18.26■□□□□ 0.51
RAB5C-205ENST00000550013 TMEM199Q8N511 208 aa18.26■□□□□ 0.51
RAB5C-205ENST00000550013 CYP39A1Q9NYL5 469 aa18.26■□□□□ 0.51
RAB5C-205ENST00000550013 GBF1Q92538 1859 aa18.26■□□□□ 0.51
RAB5C-205ENST00000550013 DYNC1LI2O43237 492 aaPredicted RBP18.25■□□□□ 0.51
RAB5C-205ENST00000550013 FSCN1Q16658 493 aaKnown RBP18.25■□□□□ 0.51
RAB5C-205ENST00000550013 VPS53Q5VIR6 699 aa18.25■□□□□ 0.51
RAB5C-205ENST00000550013 EEPD1Q7L9B9 569 aa18.25■□□□□ 0.51
RAB5C-205ENST00000550013 FBXO16Q8IX29 292 aaPredicted RBP18.25■□□□□ 0.51
RAB5C-205ENST00000550013 SLC43A3Q8NBI5 491 aa18.25■□□□□ 0.51
RAB5C-205ENST00000550013 PURBQ96QR8 312 aaKnown RBP18.25■□□□□ 0.51
RAB5C-205ENST00000550013 PBX4Q9BYU1 374 aa18.25■□□□□ 0.51
RAB5C-205ENST00000550013 AP5M1Q9H0R1 490 aa18.25■□□□□ 0.51
RAB5C-205ENST00000550013 GRIN2DO15399 1336 aa18.24■□□□□ 0.51
RAB5C-205ENST00000550013 UMODL1Q5DID0 1318 aa18.24■□□□□ 0.51
RAB5C-205ENST00000550013 SALL3Q9BXA9 1300 aa18.24■□□□□ 0.51
RAB5C-205ENST00000550013 RANBP6O60518 1105 aaKnown RBP18.24■□□□□ 0.51
RAB5C-205ENST00000550013 PPP4R3BQ5MIZ7 849 aa18.24■□□□□ 0.51
RAB5C-205ENST00000550013 TAPT1Q6NXT6 567 aa18.24■□□□□ 0.51
RAB5C-205ENST00000550013 PSRC1Q6PGN9 363 aaPredicted RBP18.24■□□□□ 0.51
RAB5C-205ENST00000550013 NSMFQ6X4W1 530 aa18.24■□□□□ 0.51
RAB5C-205ENST00000550013 CCPG1Q9ULG6 757 aa18.24■□□□□ 0.51
RAB5C-205ENST00000550013 CHD7Q9P2D1 2997 aa18.23■□□□□ 0.51
RAB5C-205ENST00000550013 SLC16A2P36021 539 aa18.23■□□□□ 0.51
RAB5C-205ENST00000550013 ITGA7Q13683 1181 aa18.23■□□□□ 0.51
RAB5C-205ENST00000550013 CCDC96Q2M329 555 aa18.23■□□□□ 0.51
RAB5C-205ENST00000550013 TTBK2Q6IQ55 1244 aa18.23■□□□□ 0.51
RAB5C-205ENST00000550013 TRPV6Q9H1D0 765 aa18.23■□□□□ 0.51
RAB5C-205ENST00000550013 HIPK3Q9H422 1215 aa18.23■□□□□ 0.51
RAB5C-205ENST00000550013 IL23AQ9NPF7 189 aa18.23■□□□□ 0.51
RAB5C-205ENST00000550013 CXXC1Q9P0U4 656 aaPredicted RBP18.23■□□□□ 0.51
RAB5C-205ENST00000550013 ANAPC4Q9UJX5 808 aa18.23■□□□□ 0.51
RAB5C-205ENST00000550013 CABYRO75952 493 aa18.22■□□□□ 0.51
RAB5C-205ENST00000550013 NOVP48745 357 aa18.22■□□□□ 0.51
RAB5C-205ENST00000550013 PSMC6P62333 389 aa18.22■□□□□ 0.51
RAB5C-205ENST00000550013 IQSEC1Q6DN90 963 aa18.22■□□□□ 0.51
RAB5C-205ENST00000550013 DCAF4Q8WV16 495 aa18.22■□□□□ 0.51
RAB5C-205ENST00000550013 PRDM12Q9H4Q4 367 aa18.22■□□□□ 0.51
RAB5C-205ENST00000550013 PRDM6Q9NQX0 595 aa18.22■□□□□ 0.51
RAB5C-205ENST00000550013 ORC4O43929 436 aa18.21■□□□□ 0.51
RAB5C-205ENST00000550013 ICAM1P05362 532 aa18.21■□□□□ 0.51
RAB5C-205ENST00000550013 CCL23P55773 120 aa18.21■□□□□ 0.51
RAB5C-205ENST00000550013 HERVK_113Q902F9 699 aa18.21■□□□□ 0.51
RAB5C-205ENST00000550013 NOC4LQ9BVI4 516 aaKnown RBP18.21■□□□□ 0.51
RAB5C-205ENST00000550013 RANBP17Q9H2T7 1088 aaKnown RBP18.21■□□□□ 0.51
RAB5C-205ENST00000550013 VTA1Q9NP79 307 aa18.21■□□□□ 0.51
RAB5C-205ENST00000550013 NFIBO00712 420 aa18.2■□□□□ 0.5
RAB5C-205ENST00000550013 ZEB2O60315 1214 aa18.2■□□□□ 0.5
RAB5C-205ENST00000550013 B4GALT4O60513 344 aa18.2■□□□□ 0.5
RAB5C-205ENST00000550013 BAATQ14032 418 aaPredicted RBP18.2■□□□□ 0.5
RAB5C-205ENST00000550013 RRP12Q5JTH9 1297 aaKnown RBP18.2■□□□□ 0.5
RAB5C-205ENST00000550013 SYDE2Q5VT97 1194 aa18.2■□□□□ 0.5
RAB5C-205ENST00000550013 KIAA1211Q6ZU35 1233 aa18.2■□□□□ 0.5
RAB5C-205ENST00000550013 MORC4Q8TE76 937 aa18.2■□□□□ 0.5
RAB5C-205ENST00000550013 PPM1EQ8WY54 764 aa18.2■□□□□ 0.5
RAB5C-205ENST00000550013 GAS2L1Q99501 681 aaPredicted RBP18.2■□□□□ 0.5
RAB5C-205ENST00000550013 WNT8AQ9H1J5 351 aa18.2■□□□□ 0.5
RAB5C-205ENST00000550013 TOMM22Q9NS69 142 aa18.2■□□□□ 0.5
RAB5C-205ENST00000550013 Q9Y3F1 56 aa18.2■□□□□ 0.5
RAB5C-205ENST00000550013 FRMPD2Q68DX3 1309 aaPredicted RBP18.2■□□□□ 0.5
RAB5C-205ENST00000550013 FGBP02675 491 aa18.19■□□□□ 0.5
RAB5C-205ENST00000550013 FGRP09769 529 aa18.19■□□□□ 0.5
RAB5C-205ENST00000550013 ALX1Q15699 326 aa18.19■□□□□ 0.5
RAB5C-205ENST00000550013 ANKRD45Q5TZF3 282 aa18.19■□□□□ 0.5
RAB5C-205ENST00000550013 BTNL9Q6UXG8 535 aa18.19■□□□□ 0.5
RAB5C-205ENST00000550013 OTOP2Q7RTS6 562 aa18.19■□□□□ 0.5
RAB5C-205ENST00000550013 EVI5LQ96CN4 794 aa18.19■□□□□ 0.5
RAB5C-205ENST00000550013 FAM227BQ96M60 508 aa18.19■□□□□ 0.5
RAB5C-205ENST00000550013 TMEM47Q9BQJ4 181 aa18.19■□□□□ 0.5
RAB5C-205ENST00000550013 NKX2-4Q9H2Z4 354 aa18.19■□□□□ 0.5
RAB5C-205ENST00000550013 GPCPD1Q9NPB8 672 aa18.19■□□□□ 0.5
RAB5C-205ENST00000550013 A0A0D9SFI3 127 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms