RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 PAXIP1Q6ZW49 1069 aaPredicted RBP33.03■■■□□ 2.88
BRF1-213ENST00000548421 BRAPQ7Z569 592 aa33.03■■■□□ 2.88
BRF1-213ENST00000548421 OXER1Q8TDS5 423 aa33.03■■■□□ 2.88
BRF1-213ENST00000548421 GLT8D2Q9H1C3 349 aa33.03■■■□□ 2.88
BRF1-213ENST00000548421 TAL1P17542 331 aaPredicted RBP33.02■■■□□ 2.88
BRF1-213ENST00000548421 TMEM132BQ14DG7 1078 aa33.02■■■□□ 2.88
BRF1-213ENST00000548421 CUL5Q93034 780 aa33.02■■■□□ 2.88
BRF1-213ENST00000548421 PTPN18Q99952 460 aa33.02■■■□□ 2.88
BRF1-213ENST00000548421 RIC8AQ9NPQ8 531 aa33.02■■■□□ 2.88
BRF1-213ENST00000548421 ZNF214Q9UL59 606 aaPredicted RBP33.02■■■□□ 2.88
BRF1-213ENST00000548421 MRPL11Q9Y3B7 192 aaKnown RBP33.02■■■□□ 2.88
BRF1-213ENST00000548421 RBBP6Q7Z6E9 1792 aaKnown RBP33.01■■■□□ 2.88
BRF1-213ENST00000548421 NR5A1Q13285 461 aa33.01■■■□□ 2.88
BRF1-213ENST00000548421 FAM43AQ8N2R8 423 aa33.01■■■□□ 2.88
BRF1-213ENST00000548421 PSTPIP2Q9H939 334 aa33.01■■■□□ 2.88
BRF1-213ENST00000548421 RASSF10A6NK89 507 aa33■■■□□ 2.87
BRF1-213ENST00000548421 MRPL12P52815 198 aaKnown RBP33■■■□□ 2.87
BRF1-213ENST00000548421 INHBEP58166 350 aa33■■■□□ 2.87
BRF1-213ENST00000548421 NOSTRINQ8IVI9 506 aa33■■■□□ 2.87
BRF1-213ENST00000548421 GTF3C2Q8WUA4 911 aaPredicted RBP33■■■□□ 2.87
BRF1-213ENST00000548421 TEX13BQ9BXU2 312 aa32.99■■■□□ 2.87
BRF1-213ENST00000548421 M0R2N6 131 aa32.99■■■□□ 2.87
BRF1-213ENST00000548421 C1QTNF8P60827 252 aa32.99■■■□□ 2.87
BRF1-213ENST00000548421 SNRNP48Q6IEG0 339 aaKnown RBP32.99■■■□□ 2.87
BRF1-213ENST00000548421 CYP4F22Q6NT55 531 aa32.99■■■□□ 2.87
BRF1-213ENST00000548421 REXO1Q8N1G1 1221 aaKnown RBP32.99■■■□□ 2.87
BRF1-213ENST00000548421 TNFRSF25Q93038 417 aa32.99■■■□□ 2.87
BRF1-213ENST00000548421 ZCCHC17Q9NP64 241 aaKnown RBP32.99■■■□□ 2.87
BRF1-213ENST00000548421 ADAMTS3O15072 1205 aa32.98■■■□□ 2.87
BRF1-213ENST00000548421 CYP2C8P10632 490 aa32.98■■■□□ 2.87
BRF1-213ENST00000548421 ALAS1P13196 640 aa32.98■■■□□ 2.87
BRF1-213ENST00000548421 SREBF2Q12772 1141 aa32.98■■■□□ 2.87
BRF1-213ENST00000548421 DEFB115Q30KQ5 88 aa32.98■■■□□ 2.87
BRF1-213ENST00000548421 POTEEQ6S8J3 1075 aa32.98■■■□□ 2.87
BRF1-213ENST00000548421 TEX2Q8IWB9 1127 aa32.98■■■□□ 2.87
BRF1-213ENST00000548421 STAT3P40763 770 aa32.97■■■□□ 2.87
BRF1-213ENST00000548421 SMCR8Q8TEV9 937 aaPredicted RBP32.97■■■□□ 2.87
BRF1-213ENST00000548421 PARK7Q99497 189 aaKnown RBP32.97■■■□□ 2.87
BRF1-213ENST00000548421 BTBD7Q9P203 1132 aa32.97■■■□□ 2.87
BRF1-213ENST00000548421 PCDHA6Q9UN73 950 aa32.97■■■□□ 2.87
BRF1-213ENST00000548421 PCDHA8Q9Y5H6 950 aa32.97■■■□□ 2.87
BRF1-213ENST00000548421 OPLAHO14841 1288 aa32.96■■■□□ 2.87
BRF1-213ENST00000548421 GRM1Q13255 1194 aa32.96■■■□□ 2.87
BRF1-213ENST00000548421 PLS1Q14651 629 aa32.96■■■□□ 2.87
BRF1-213ENST00000548421 FOXD4L6Q3SYB3 417 aaPredicted RBP32.96■■■□□ 2.87
BRF1-213ENST00000548421 FOXD4L3Q6VB84 417 aaPredicted RBP32.96■■■□□ 2.87
BRF1-213ENST00000548421 RABGAP1Q9Y3P9 1069 aa32.96■■■□□ 2.87
BRF1-213ENST00000548421 TCHHQ07283 1943 aa32.95■■■□□ 2.87
BRF1-213ENST00000548421 TKFCQ3LXA3 575 aa32.95■■■□□ 2.87
BRF1-213ENST00000548421 RASGRP4Q8TDF6 673 aa32.95■■■□□ 2.87
BRF1-213ENST00000548421 PAGR1Q9BTK6 254 aa32.95■■■□□ 2.87
BRF1-213ENST00000548421 IGF2BP3O00425 579 aaKnown RBP eCLIP32.94■■■□□ 2.86
BRF1-213ENST00000548421 CNMDO75829 334 aa32.94■■■□□ 2.86
BRF1-213ENST00000548421 CLK2P49760 499 aaKnown RBP32.94■■■□□ 2.86
BRF1-213ENST00000548421 NOGQ13253 232 aa32.94■■■□□ 2.86
BRF1-213ENST00000548421 FAM173BQ6P4H8 233 aa32.94■■■□□ 2.86
BRF1-213ENST00000548421 TRERF1Q96PN7 1200 aa32.94■■■□□ 2.86
BRF1-213ENST00000548421 SPATC1LQ9H0A9 340 aa32.94■■■□□ 2.86
BRF1-213ENST00000548421 HOMER2Q9NSB8 354 aa32.94■■■□□ 2.86
BRF1-213ENST00000548421 BIN2Q9UBW5 565 aaPredicted RBP32.94■■■□□ 2.86
BRF1-213ENST00000548421 UBE2SQ16763 222 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 MYSM1Q5VVJ2 828 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 IFNL1Q8IU54 200 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 CLEC4DQ8WXI8 215 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 RNF146Q9NTX7 359 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 RBPJLQ9UBG7 517 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 RIPK3Q9Y572 518 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 CCDC194A0A1B0GVG4 234 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 PIK3CDO00329 1044 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 MEIS2O14770 477 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 GCLCP48506 637 aaPredicted RBP32.93■■■□□ 2.86
BRF1-213ENST00000548421 USP17L6PQ6QN14 398 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 CLEC17AQ6ZS10 378 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 KRT25Q7Z3Z0 450 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 MCF2L2Q86YR7 1114 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 RIOX2Q8IUF8 465 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 CAPNS2Q96L46 248 aa32.93■■■□□ 2.86
BRF1-213ENST00000548421 EARS2Q5JPH6 523 aaKnown RBP32.92■■■□□ 2.86
BRF1-213ENST00000548421 JAKMIP3Q5VZ66 844 aa32.92■■■□□ 2.86
BRF1-213ENST00000548421 MCTP2Q6DN12 878 aa32.92■■■□□ 2.86
BRF1-213ENST00000548421 PIK3AP1Q6ZUJ8 805 aa32.92■■■□□ 2.86
BRF1-213ENST00000548421 TXNRD2Q9NNW7 524 aa32.92■■■□□ 2.86
BRF1-213ENST00000548421 NFIBO00712 420 aa32.91■■■□□ 2.86
BRF1-213ENST00000548421 CFBP00751 764 aa32.91■■■□□ 2.86
BRF1-213ENST00000548421 TM4SF4P48230 202 aa32.91■■■□□ 2.86
BRF1-213ENST00000548421 DNM1Q05193 864 aaKnown RBP32.91■■■□□ 2.86
BRF1-213ENST00000548421 MUM1L1Q5H9M0 696 aa32.91■■■□□ 2.86
BRF1-213ENST00000548421 TMEM260Q9NX78 707 aa32.91■■■□□ 2.86
BRF1-213ENST00000548421 GCOM1H8Y6P7 765 aaPredicted RBP32.9■■■□□ 2.86
BRF1-213ENST00000548421 PEX10O60683 326 aa32.9■■■□□ 2.86
BRF1-213ENST00000548421 BAG4O95429 457 aaKnown RBP32.9■■■□□ 2.86
BRF1-213ENST00000548421 POLR2MP0CAP2 368 aa32.9■■■□□ 2.86
BRF1-213ENST00000548421 AP3B2Q13367 1082 aa32.9■■■□□ 2.86
BRF1-213ENST00000548421 NOM1Q5C9Z4 860 aaKnown RBP32.9■■■□□ 2.86
BRF1-213ENST00000548421 SAMD3Q8N6K7 520 aa32.9■■■□□ 2.86
BRF1-213ENST00000548421 ZNF396Q96N95 335 aaPredicted RBP32.9■■■□□ 2.86
BRF1-213ENST00000548421 GBP4Q96PP9 640 aa32.9■■■□□ 2.86
BRF1-213ENST00000548421 ZIC5Q96T25 663 aa32.9■■■□□ 2.86
BRF1-213ENST00000548421 FAM205CA6NFA0 338 aa32.89■■■□□ 2.86
BRF1-213ENST00000548421 GHRHRQ02643 423 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms