RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 OR52Z1P0C646 297 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 UBA7P41226 1012 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 PDIA5Q14554 519 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 RRP1BQ14684 758 aaKnown RBP15.24■□□□□ 0.03
PTCH1-215ENST00000547672 LETM2Q2VYF4 491 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 HS1BP3Q53T59 392 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 JAKMIP3Q5VZ66 844 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 MOXD1Q6UVY6 613 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 C4orf32Q8N8J7 132 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 BPIFA3Q9BQP9 254 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 WDR18Q9BV38 432 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 MAGEF1Q9HAY2 307 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 PRR12Q9ULL5 1215 aa15.24■□□□□ 0.03
PTCH1-215ENST00000547672 C19orf81C9J6K1 198 aa15.23■□□□□ 0.03
PTCH1-215ENST00000547672 MARCH6O60337 910 aa15.23■□□□□ 0.03
PTCH1-215ENST00000547672 CLK2P49760 499 aaKnown RBP15.23■□□□□ 0.03
PTCH1-215ENST00000547672 PRELPP51888 382 aa15.23■□□□□ 0.03
PTCH1-215ENST00000547672 LONRF3Q496Y0 759 aa15.23■□□□□ 0.03
PTCH1-215ENST00000547672 ANGEL2Q5VTE6 544 aaKnown RBP15.23■□□□□ 0.03
PTCH1-215ENST00000547672 PRPF38AQ8NAV1 312 aaKnown RBP15.23■□□□□ 0.03
PTCH1-215ENST00000547672 SMARCE1Q969G3 411 aa15.23■□□□□ 0.03
PTCH1-215ENST00000547672 DCPSQ96C86 337 aaKnown RBP15.23■□□□□ 0.03
PTCH1-215ENST00000547672 CCSER1Q9C0I3 900 aa15.23■□□□□ 0.03
PTCH1-215ENST00000547672 RNF181Q9P0P0 153 aa15.23■□□□□ 0.03
PTCH1-215ENST00000547672 TUBE1Q9UJT0 475 aa15.23■□□□□ 0.03
PTCH1-215ENST00000547672 RABGAP1Q9Y3P9 1069 aa15.23■□□□□ 0.03
PTCH1-215ENST00000547672 CTDP1Q9Y5B0 961 aaPredicted RBP15.23■□□□□ 0.03
PTCH1-215ENST00000547672 ABCB11O95342 1321 aa15.22■□□□□ 0.03
PTCH1-215ENST00000547672 SPDYE3A6NKU9 549 aa15.22■□□□□ 0.03
PTCH1-215ENST00000547672 PIK3CDO00329 1044 aa15.22■□□□□ 0.03
PTCH1-215ENST00000547672 GRIN3BO60391 1043 aa15.22■□□□□ 0.03
PTCH1-215ENST00000547672 SLURP2P0DP57 97 aa15.22■□□□□ 0.03
PTCH1-215ENST00000547672 JAG1P78504 1218 aa15.22■□□□□ 0.03
PTCH1-215ENST00000547672 POSTNQ15063 836 aa15.22■□□□□ 0.03
PTCH1-215ENST00000547672 SCYL3Q8IZE3 742 aa15.22■□□□□ 0.03
PTCH1-215ENST00000547672 RASGRP4Q8TDF6 673 aa15.22■□□□□ 0.03
PTCH1-215ENST00000547672 ACER1Q8TDN7 264 aa15.22■□□□□ 0.03
PTCH1-215ENST00000547672 SYMPKQ92797 1274 aaKnown RBP15.22■□□□□ 0.03
PTCH1-215ENST00000547672 MAF1Q9H063 256 aa15.22■□□□□ 0.03
PTCH1-215ENST00000547672 MAP3K20Q9NYL2 800 aaKnown RBP15.22■□□□□ 0.03
PTCH1-215ENST00000547672 SHTN1A0MZ66 631 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 TPM3P06753 285 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 HOXA7P31268 230 aaPredicted RBP15.21■□□□□ 0.03
PTCH1-215ENST00000547672 ECE1P42892 770 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 AMPD3Q01432 767 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 CALCRLQ16602 461 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 FAM83BQ5T0W9 1011 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 RASGRP2Q7LDG7 609 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 MCF2L2Q86YR7 1114 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 SLFN12Q8IYM2 578 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 MLKLQ8NB16 471 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 RASSF8Q8NHQ8 419 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 ZC3H15Q8WU90 426 aaKnown RBP15.21■□□□□ 0.03
PTCH1-215ENST00000547672 CCDC47Q96A33 483 aaKnown RBP15.21■□□□□ 0.03
PTCH1-215ENST00000547672 GSDMAQ96QA5 445 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 PANK2Q9BZ23 570 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 LRRC27Q9C0I9 530 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 RANBP17Q9H2T7 1088 aaKnown RBP15.21■□□□□ 0.03
PTCH1-215ENST00000547672 CBX8Q9HC52 389 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 RMND1Q9NWS8 449 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 SERTAD1Q9UHV2 236 aa15.21■□□□□ 0.03
PTCH1-215ENST00000547672 CYP3A7-CYP3A51PA0A087WV96 503 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 GOLGA6L6A8MZA4 724 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 PPP1R11O60927 126 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-215ENST00000547672 CYP3A7P24462 503 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 NF2P35240 595 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 MDM2Q00987 491 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-215ENST00000547672 NOM1Q5C9Z4 860 aaKnown RBP15.2■□□□□ 0.02
PTCH1-215ENST00000547672 NBPF12Q5TAG4 269 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-215ENST00000547672 NT5DC1Q5TFE4 455 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 RRAGBQ5VZM2 374 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 USP50Q70EL3 339 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-215ENST00000547672 SULF1Q8IWU6 871 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 SPICE1Q8N0Z3 855 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 RBM46Q8TBY0 533 aaKnown RBP15.2■□□□□ 0.02
PTCH1-215ENST00000547672 CALML4Q96GE6 196 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 EPSTI1Q96J88 318 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 NUP88Q99567 741 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-215ENST00000547672 DNAJC25Q9H1X3 360 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 SBF1O95248 1867 aa15.2■□□□□ 0.02
PTCH1-215ENST00000547672 GCOM1H8Y6P7 765 aaPredicted RBP15.19■□□□□ 0.02
PTCH1-215ENST00000547672 TBX3O15119 743 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 PPP1R12BO60237 982 aaPredicted RBP15.19■□□□□ 0.02
PTCH1-215ENST00000547672 ZBED4O75132 1171 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 EGFRP00533 1210 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 POLR2MP0CAP2 368 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 EPS15P42566 896 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
PTCH1-215ENST00000547672 SHROOM1Q2M3G4 852 aaPredicted RBP15.19■□□□□ 0.02
PTCH1-215ENST00000547672 SPECC1Q5M775 1068 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 NOL9Q5SY16 702 aaKnown RBP15.19■□□□□ 0.02
PTCH1-215ENST00000547672 C9orf131Q5VYM1 1079 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 PDILTQ8N807 584 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 ZNF280CQ8ND82 737 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 KIFC2Q96AC6 838 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 DHX58Q96C10 678 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 PDLIM2Q96JY6 352 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 SLF1Q9BQI6 1058 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 GGA3Q9NZ52 723 aa15.19■□□□□ 0.02
PTCH1-215ENST00000547672 DDX25Q9UHL0 483 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms