RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RPTNQ6XPR3 784 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 GGNQ86UU5 652 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 PPFIBP1Q86W92 1011 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 NAT16Q8N8M0 369 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 GINM1Q9NU53 330 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 IMPACTQ9P2X3 320 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 FBXL21Q9UKT6 434 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 PCDHA5Q9Y5H7 936 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 A0A1W2PQ27 194 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 A0A1W2PQ64 194 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 A0A1W2PQC6 194 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 A0A1W2PQD8 194 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 ZNF205O95201 554 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 PFKLP17858 780 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 CTSKP43235 329 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 NFKB2Q00653 900 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 PLP2Q04941 152 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 LRRFIP1Q32MZ4 808 aaKnown RBP6.34□□□□□ -1.39
SCAF11-210ENST00000547654 ZC3H14Q6PJT7 736 aaKnown RBP6.34□□□□□ -1.39
SCAF11-210ENST00000547654 CRTC3Q6UUV7 619 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 NLGN1Q8N2Q7 840 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 ACSL6Q9UKU0 697 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 PPT2Q9UMR5 302 aa6.34□□□□□ -1.39
SCAF11-210ENST00000547654 LTBP3Q9NS15 1303 aa6.33□□□□□ -1.4
SCAF11-210ENST00000547654 LIMS1P48059 325 aa6.33□□□□□ -1.4
SCAF11-210ENST00000547654 ZNF200P98182 395 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-210ENST00000547654 NR1I3Q14994 352 aa6.33□□□□□ -1.4
SCAF11-210ENST00000547654 RUFY4Q6ZNE9 571 aa6.33□□□□□ -1.4
SCAF11-210ENST00000547654 LSRQ86X29 649 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-210ENST00000547654 NT5DC4Q86YG4 428 aa6.33□□□□□ -1.4
SCAF11-210ENST00000547654 ZNF654Q8IZM8 581 aa6.33□□□□□ -1.4
SCAF11-210ENST00000547654 UBXN4Q92575 508 aa6.33□□□□□ -1.4
SCAF11-210ENST00000547654 SLC6A18Q96N87 628 aa6.33□□□□□ -1.4
SCAF11-210ENST00000547654 DSCC1Q9BVC3 393 aa6.33□□□□□ -1.4
SCAF11-210ENST00000547654 AP5S1Q9NUS5 200 aa6.33□□□□□ -1.4
SCAF11-210ENST00000547654 SUCOQ9UBS9 1254 aaKnown RBP6.33□□□□□ -1.4
SCAF11-210ENST00000547654 KCNC1P48547 511 aa6.32□□□□□ -1.4
SCAF11-210ENST00000547654 MAPKAPK2P49137 400 aa6.32□□□□□ -1.4
SCAF11-210ENST00000547654 CBX2Q14781 532 aaPredicted RBP6.32□□□□□ -1.4
SCAF11-210ENST00000547654 ANKRD39Q53RE8 183 aa6.32□□□□□ -1.4
SCAF11-210ENST00000547654 C9orf131Q5VYM1 1079 aa6.32□□□□□ -1.4
SCAF11-210ENST00000547654 JMJD8Q96S16 334 aa6.32□□□□□ -1.4
SCAF11-210ENST00000547654 USP40Q9NVE5 1235 aa6.32□□□□□ -1.4
SCAF11-210ENST00000547654 PPP1R1BQ9UD71 204 aaPredicted RBP6.32□□□□□ -1.4
SCAF11-210ENST00000547654 A0A1W2PQJ5 194 aa6.31□□□□□ -1.4
SCAF11-210ENST00000547654 VAV1P15498 845 aa6.31□□□□□ -1.4
SCAF11-210ENST00000547654 MCM4P33991 863 aa6.31□□□□□ -1.4
SCAF11-210ENST00000547654 GIPRP48546 466 aa6.31□□□□□ -1.4
SCAF11-210ENST00000547654 EFEMP1Q12805 493 aa6.31□□□□□ -1.4
SCAF11-210ENST00000547654 TARBP2Q15633 366 aaKnown RBP6.31□□□□□ -1.4
SCAF11-210ENST00000547654 NAALADL2Q58DX5 795 aa6.31□□□□□ -1.4
SCAF11-210ENST00000547654 UNC5AQ6ZN44 842 aa6.31□□□□□ -1.4
SCAF11-210ENST00000547654 JAMLQ86YT9 394 aa6.31□□□□□ -1.4
SCAF11-210ENST00000547654 TP53I13Q8NBR0 393 aaPredicted RBP6.31□□□□□ -1.4
SCAF11-210ENST00000547654 SHDQ96IW2 340 aa6.31□□□□□ -1.4
SCAF11-210ENST00000547654 TM9SF2Q99805 663 aa6.31□□□□□ -1.4
SCAF11-210ENST00000547654 PRR13Q9NZ81 148 aa6.31□□□□□ -1.4
SCAF11-210ENST00000547654 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.31□□□□□ -1.4
SCAF11-210ENST00000547654 FFAR3O14843 346 aa6.3□□□□□ -1.4
SCAF11-210ENST00000547654 IMPDH2P12268 514 aa6.3□□□□□ -1.4
SCAF11-210ENST00000547654 ERCC5P28715 1186 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-210ENST00000547654 PMS1P54277 932 aaKnown RBP6.3□□□□□ -1.4
SCAF11-210ENST00000547654 COL9A2Q14055 689 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-210ENST00000547654 RTP5Q14D33 572 aa6.3□□□□□ -1.4
SCAF11-210ENST00000547654 CWF19L1Q69YN2 538 aaKnown RBP6.3□□□□□ -1.4
SCAF11-210ENST00000547654 TMEM52Q8NDY8 209 aa6.3□□□□□ -1.4
SCAF11-210ENST00000547654 GSNP06396 782 aa6.29□□□□□ -1.4
SCAF11-210ENST00000547654 GSTM1P09488 218 aa6.29□□□□□ -1.4
SCAF11-210ENST00000547654 IGFBP6P24592 240 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-210ENST00000547654 GUCY2CP25092 1073 aa6.29□□□□□ -1.4
SCAF11-210ENST00000547654 SLURP1P55000 103 aa6.29□□□□□ -1.4
SCAF11-210ENST00000547654 CAP1Q01518 475 aa6.29□□□□□ -1.4
SCAF11-210ENST00000547654 AUHQ13825 339 aaKnown RBP6.29□□□□□ -1.4
SCAF11-210ENST00000547654 ZXDCQ2QGD7 858 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-210ENST00000547654 AXDND1Q5T1B0 1012 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-210ENST00000547654 ZNF513Q8N8E2 541 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-210ENST00000547654 GPRASP2Q96D09 838 aa6.29□□□□□ -1.4
SCAF11-210ENST00000547654 TGIF2Q9GZN2 237 aa6.29□□□□□ -1.4
SCAF11-210ENST00000547654 TMPRSS5Q9H3S3 457 aa6.29□□□□□ -1.4
SCAF11-210ENST00000547654 ZNF214Q9UL59 606 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-210ENST00000547654 PALD1Q9ULE6 856 aa6.29□□□□□ -1.4
SCAF11-210ENST00000547654 FAN1Q9Y2M0 1017 aa6.29□□□□□ -1.4
SCAF11-210ENST00000547654 K7ESM1 405 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 PPM1GO15355 546 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-210ENST00000547654 CBFA2T2O43439 604 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 PRICKLE3O43900 615 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-210ENST00000547654 CYBBP04839 570 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 MSL3P1P0C860 447 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 RTP2Q5QGT7 225 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 UBXN11Q5T124 520 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 HLA-DQA1Q5Y7H0 255 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 BICRALQ6AI39 1079 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 PAQR3Q6TCH7 311 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 FAM169BQ8N8A8 192 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 SRRTQ9BXP5 876 aaKnown RBP6.28□□□□□ -1.4
SCAF11-210ENST00000547654 ACBD3Q9H3P7 528 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 SUSD2Q9UGT4 822 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 EFR3BQ9Y2G0 817 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 ADAMTS20P59510 1910 aa6.28□□□□□ -1.4
SCAF11-210ENST00000547654 SMARCA5O60264 1052 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms