RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 FCGRTP55899 365 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 KCNA1Q09470 495 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 AAMPQ13685 434 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 TNFAIP1Q13829 316 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 CCINQ13939 588 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 ZNF468Q5VIY5 522 aaPredicted RBP8.44□□□□□ -1.06
CCDC60-205ENST00000546345 GPAT2Q6NUI2 795 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 C15orf52Q6ZUT6 534 aaKnown RBP8.44□□□□□ -1.06
CCDC60-205ENST00000546345 GOLGA6L1Q8N7Z2 621 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 MYLIPQ8WY64 445 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 FAM122AQ96E09 287 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 GSX2Q9BZM3 304 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 TTYH1Q9H313 450 aaPredicted RBP8.44□□□□□ -1.06
CCDC60-205ENST00000546345 CWC25Q9NXE8 425 aaPredicted RBP8.44□□□□□ -1.06
CCDC60-205ENST00000546345 GNEQ9Y223 722 aaKnown RBP8.44□□□□□ -1.06
CCDC60-205ENST00000546345 SIPA1L1O43166 1804 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 CHL1O00533 1208 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 WDHD1O75717 1129 aaPredicted RBP8.43□□□□□ -1.06
CCDC60-205ENST00000546345 IGKV5-2P06315 115 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 ADH6P28332 368 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 EIF1AXP47813 144 aaKnown RBP8.43□□□□□ -1.06
CCDC60-205ENST00000546345 CACNB3P54284 484 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 PCBP4P57723 403 aaKnown RBP8.43□□□□□ -1.06
CCDC60-205ENST00000546345 GRIK5Q16478 980 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 LYPD4Q6UWN0 246 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 SYT9Q86SS6 491 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 GPR152Q8TDT2 470 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 WHAMMQ8TF30 809 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 BHMTQ93088 406 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 PNMA5Q96PV4 448 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 HYPKQ9NX55 129 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 SYNGAP1Q96PV0 1343 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 CDK5RAP2Q96SN8 1893 aa8.43□□□□□ -1.06
CCDC60-205ENST00000546345 TMEM265A0A087WTH1 108 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 NEURL1BA8MQ27 555 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 PATL2C9JE40 543 aaKnown RBP8.42□□□□□ -1.06
CCDC60-205ENST00000546345 CELA2BP08218 269 aaPredicted RBP8.42□□□□□ -1.06
CCDC60-205ENST00000546345 COL6A1P12109 1028 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 HSP90B1P14625 803 aaKnown RBP8.42□□□□□ -1.06
CCDC60-205ENST00000546345 CAPN2P17655 700 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 MAP3K10Q02779 954 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 PPATQ06203 517 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 CHRNDQ07001 517 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 ZNF385CQ66K41 422 aaPredicted RBP8.42□□□□□ -1.06
CCDC60-205ENST00000546345 RAB44Q7Z6P3 723 aaPredicted RBP8.42□□□□□ -1.06
CCDC60-205ENST00000546345 ATCAYQ86WG3 371 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 GLYCTKQ8IVS8 523 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 DZIP1LQ8IYY4 767 aaKnown RBP8.42□□□□□ -1.06
CCDC60-205ENST00000546345 PARK7Q99497 189 aaKnown RBP8.42□□□□□ -1.06
CCDC60-205ENST00000546345 C11orf49Q9H6J7 331 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 FNDC3AQ9Y2H6 1198 aaKnown RBP8.42□□□□□ -1.06
CCDC60-205ENST00000546345 MAPK8IP3Q9UPT6 1336 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 LRRC37A2A6NM11 1700 aa8.42□□□□□ -1.06
CCDC60-205ENST00000546345 ATRNL1Q5VV63 1379 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 H3BRB1 525 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 XYLBO75191 536 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 PCSK2P16519 638 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
CCDC60-205ENST00000546345 RBM5P52756 815 aaKnown RBP eCLIP8.41□□□□□ -1.06
CCDC60-205ENST00000546345 MAP3K12Q12852 859 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 LRRC26Q2I0M4 334 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 HOMEZQ8IX15 550 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 SVOPQ8N4V2 548 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 GALNT6Q8NCL4 622 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 METTL22Q9BUU2 404 aaPredicted RBP8.41□□□□□ -1.06
CCDC60-205ENST00000546345 TUT1Q9H6E5 874 aaKnown RBP8.41□□□□□ -1.06
CCDC60-205ENST00000546345 KLF15Q9UIH9 416 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 OGDHLQ9ULD0 1010 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.41□□□□□ -1.06
CCDC60-205ENST00000546345 KCNMB2Q9Y691 235 aa8.41□□□□□ -1.06
CCDC60-205ENST00000546345 TNPO2O14787 897 aaKnown RBP8.4□□□□□ -1.06
CCDC60-205ENST00000546345 OIP5O43482 229 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 SIN3BO75182 1162 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 TAF5LO75529 589 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 SASH3O75995 380 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 RPLP1P05386 114 aaKnown RBP8.4□□□□□ -1.06
CCDC60-205ENST00000546345 TMPOP42166 694 aaKnown RBP8.4□□□□□ -1.06
CCDC60-205ENST00000546345 CRKP46108 304 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 CASP7P55210 303 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 RIPK4P57078 832 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 DNM1Q05193 864 aaKnown RBP8.4□□□□□ -1.06
CCDC60-205ENST00000546345 MFSD14BQ5SR56 506 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 DUSP27Q5VZP5 1158 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 KCTD17Q8N5Z5 321 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 TTC16Q8NEE8 873 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 EDARADDQ8WWZ3 215 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 EDEM1Q92611 657 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 ANKRD2Q9GZV1 360 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 SEMA6BQ9H3T3 888 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 ENAMQ9NRM1 1142 aa8.4□□□□□ -1.06
CCDC60-205ENST00000546345 TTF2Q9UNY4 1162 aaKnown RBP8.4□□□□□ -1.06
CCDC60-205ENST00000546345 CHD7Q9P2D1 2997 aa8.4□□□□□ -1.07
CCDC60-205ENST00000546345 CHD9Q3L8U1 2897 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 XIRP2A4UGR9 3374 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 HMGCRP04035 888 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 NEFMP07197 916 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 FOSL2P15408 326 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 NFKB1P19838 968 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 TARSP26639 723 aaKnown RBP8.39□□□□□ -1.07
CCDC60-205ENST00000546345 MZF1P28698 734 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms