RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 PRR12Q9ULL5 1215 aa14.92□□□□□ -0.02
COPS7A-221ENST00000546229 UMODL1Q5DID0 1318 aa14.92□□□□□ -0.02
COPS7A-221ENST00000546229 SCN10AQ9Y5Y9 1956 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 TANC1Q9C0D5 1861 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 ERC2O15083 957 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 ORC4O43929 436 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 FOSL2P15408 326 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 CSF2RAP15509 400 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 SMPD1P17405 629 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 MCCP23508 829 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 SLC1A4P43007 532 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 SLC4A3P48751 1232 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 SNAP25P60880 206 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 BEX3Q00994 111 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 TKFCQ3LXA3 575 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 BTNL9Q6UXG8 535 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 PURBQ96QR8 312 aaKnown RBP14.91□□□□□ -0.02
COPS7A-221ENST00000546229 RANBP17Q9H2T7 1088 aaKnown RBP14.91□□□□□ -0.02
COPS7A-221ENST00000546229 ZMYM6O95789 1325 aa14.91□□□□□ -0.02
COPS7A-221ENST00000546229 PBX2P40425 430 aa14.9□□□□□ -0.02
COPS7A-221ENST00000546229 ALX1Q15699 326 aa14.9□□□□□ -0.02
COPS7A-221ENST00000546229 LRRFIP1Q32MZ4 808 aaKnown RBP14.9□□□□□ -0.02
COPS7A-221ENST00000546229 GNASQ5JWF2 1037 aa14.9□□□□□ -0.02
COPS7A-221ENST00000546229 RCSD1Q6JBY9 416 aa14.9□□□□□ -0.02
COPS7A-221ENST00000546229 TLK2Q86UE8 772 aa14.9□□□□□ -0.02
COPS7A-221ENST00000546229 CHURC1Q8WUH1 139 aa14.9□□□□□ -0.02
COPS7A-221ENST00000546229 TRERF1Q96PN7 1200 aa14.9□□□□□ -0.02
COPS7A-221ENST00000546229 PBX4Q9BYU1 374 aa14.9□□□□□ -0.02
COPS7A-221ENST00000546229 PDGFCQ9NRA1 345 aa14.9□□□□□ -0.02
COPS7A-221ENST00000546229 A0A0D9SFI3 127 aa14.89□□□□□ -0.03
COPS7A-221ENST00000546229 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.89□□□□□ -0.03
COPS7A-221ENST00000546229 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.89□□□□□ -0.03
COPS7A-221ENST00000546229 GRXCR1A8MXD5 290 aa14.89□□□□□ -0.03
COPS7A-221ENST00000546229 TNFAIP2Q03169 654 aa14.89□□□□□ -0.03
COPS7A-221ENST00000546229 PPIGQ13427 754 aaKnown RBP eCLIP14.89□□□□□ -0.03
COPS7A-221ENST00000546229 CXCL17Q6UXB2 119 aa14.89□□□□□ -0.03
COPS7A-221ENST00000546229 FBXO16Q8IX29 292 aaPredicted RBP14.89□□□□□ -0.03
COPS7A-221ENST00000546229 WNT8AQ9H1J5 351 aa14.89□□□□□ -0.03
COPS7A-221ENST00000546229 ZNF576Q9H609 170 aa14.89□□□□□ -0.03
COPS7A-221ENST00000546229 CXXC1Q9P0U4 656 aaPredicted RBP14.89□□□□□ -0.03
COPS7A-221ENST00000546229 STX8Q9UNK0 236 aa14.89□□□□□ -0.03
COPS7A-221ENST00000546229 ASB14A6NK59 587 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 NFIBO00712 420 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 ICAM1P05362 532 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 ALAS1P13196 640 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 CYP2C18P33260 490 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 FSCN1Q16658 493 aaKnown RBP14.88□□□□□ -0.03
COPS7A-221ENST00000546229 TTBK2Q6IQ55 1244 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 CCDC174Q6PII3 467 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 ZNF589Q86UQ0 364 aaPredicted RBP14.88□□□□□ -0.03
COPS7A-221ENST00000546229 DCAF4Q8WV16 495 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 CHMP4CQ96CF2 233 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 TIFAQ96CG3 184 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 FAM227BQ96M60 508 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 NOC4LQ9BVI4 516 aaKnown RBP14.88□□□□□ -0.03
COPS7A-221ENST00000546229 PPP1R12CQ9BZL4 782 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 SPC25Q9HBM1 224 aa14.88□□□□□ -0.03
COPS7A-221ENST00000546229 RBM47A0AV96 593 aaKnown RBP14.87□□□□□ -0.03
COPS7A-221ENST00000546229 TSPY2A6NKD2 308 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 B4GALT4O60513 344 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 SLC3A2P08195 630 aaKnown RBP14.87□□□□□ -0.03
COPS7A-221ENST00000546229 SNHG28P0DPA3 235 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 ACRP10323 421 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 PDE1AP54750 535 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 RRP1P56182 461 aaKnown RBP14.87□□□□□ -0.03
COPS7A-221ENST00000546229 PPP4R3BQ5MIZ7 849 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 PSRC1Q6PGN9 363 aaPredicted RBP14.87□□□□□ -0.03
COPS7A-221ENST00000546229 ZNF365Q70YC5 407 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 CLEC4DQ8WXI8 215 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 HERVK_113Q902F9 699 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 VTA1Q9NP79 307 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 IL23AQ9NPF7 189 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 Q9Y3F1 56 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 CTDP1Q9Y5B0 961 aaPredicted RBP14.87□□□□□ -0.03
COPS7A-221ENST00000546229 SCN5AQ14524 2016 aa14.87□□□□□ -0.03
COPS7A-221ENST00000546229 PTPRSQ13332 1948 aa14.86□□□□□ -0.03
COPS7A-221ENST00000546229 FGAP02671 866 aa14.86□□□□□ -0.03
COPS7A-221ENST00000546229 EDNRBP24530 442 aa14.86□□□□□ -0.03
COPS7A-221ENST00000546229 ITGA7Q13683 1181 aa14.86□□□□□ -0.03
COPS7A-221ENST00000546229 ADGRE1Q14246 886 aa14.86□□□□□ -0.03
COPS7A-221ENST00000546229 SLC30A10Q6XR72 485 aa14.86□□□□□ -0.03
COPS7A-221ENST00000546229 TMEM47Q9BQJ4 181 aa14.86□□□□□ -0.03
COPS7A-221ENST00000546229 HELLSQ9NRZ9 838 aa14.86□□□□□ -0.03
COPS7A-221ENST00000546229 TCP11L1Q9NUJ3 509 aa14.86□□□□□ -0.03
COPS7A-221ENST00000546229 CCPG1Q9ULG6 757 aa14.86□□□□□ -0.03
COPS7A-221ENST00000546229 YBX2Q9Y2T7 364 aaKnown RBP14.86□□□□□ -0.03
COPS7A-221ENST00000546229 BDP1A6H8Y1 2624 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 CABYRO75952 493 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 PDHBP11177 359 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 SLC16A2P36021 539 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 ALDH5A1P51649 535 aaPredicted RBP14.85□□□□□ -0.03
COPS7A-221ENST00000546229 PSMC6P62333 389 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 HDAC1Q13547 482 aaPredicted RBP14.85□□□□□ -0.03
COPS7A-221ENST00000546229 DUSP28Q4G0W2 176 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 SYDE2Q5VT97 1194 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 IQSEC1Q6DN90 963 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 EEPD1Q7L9B9 569 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 TBC1D10CQ8IV04 446 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 TMEM199Q8N511 208 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 EVI5LQ96CN4 794 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms