RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 DIS3Q9Y2L1 958 aaKnown RBP7.93□□□□□ -1.14
SNHG1-224ENST00000545688 ABLIM1O14639 778 aa7.92□□□□□ -1.14
SNHG1-224ENST00000545688 EPHB3P54753 998 aa7.92□□□□□ -1.14
SNHG1-224ENST00000545688 CASP7P55210 303 aa7.92□□□□□ -1.14
SNHG1-224ENST00000545688 RAB3GAP1Q15042 981 aa7.92□□□□□ -1.14
SNHG1-224ENST00000545688 ADAT2Q7Z6V5 191 aaKnown RBP7.92□□□□□ -1.14
SNHG1-224ENST00000545688 KCTD3Q9Y597 815 aa7.92□□□□□ -1.14
SNHG1-224ENST00000545688 ADAMTS20P59510 1910 aa7.91□□□□□ -1.14
SNHG1-224ENST00000545688 A0A1W2PQ27 194 aa7.91□□□□□ -1.14
SNHG1-224ENST00000545688 A0A1W2PQ64 194 aa7.91□□□□□ -1.14
SNHG1-224ENST00000545688 A0A1W2PQC6 194 aa7.91□□□□□ -1.14
SNHG1-224ENST00000545688 A0A1W2PQD8 194 aa7.91□□□□□ -1.14
SNHG1-224ENST00000545688 LCE1DQ5T752 114 aa7.91□□□□□ -1.14
SNHG1-224ENST00000545688 OLFML2BQ68BL8 750 aa7.91□□□□□ -1.14
SNHG1-224ENST00000545688 ANAPC16Q96DE5 110 aa7.91□□□□□ -1.14
SNHG1-224ENST00000545688 CGGBP1Q9UFW8 167 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-224ENST00000545688 SUSD2Q9UGT4 822 aa7.91□□□□□ -1.14
SNHG1-224ENST00000545688 STRIP2Q9ULQ0 834 aa7.91□□□□□ -1.14
SNHG1-224ENST00000545688 STXBP3O00186 592 aa7.9□□□□□ -1.14
SNHG1-224ENST00000545688 VAMP4O75379 141 aa7.9□□□□□ -1.14
SNHG1-224ENST00000545688 PPM1BO75688 479 aa7.9□□□□□ -1.14
SNHG1-224ENST00000545688 CDR1P51861 262 aa7.9□□□□□ -1.14
SNHG1-224ENST00000545688 DPY19L1Q2PZI1 675 aa7.9□□□□□ -1.14
SNHG1-224ENST00000545688 KIAA1211LQ6NV74 962 aa7.9□□□□□ -1.14
SNHG1-224ENST00000545688 RPTNQ6XPR3 784 aa7.9□□□□□ -1.14
SNHG1-224ENST00000545688 TMC6Q7Z403 805 aa7.9□□□□□ -1.14
SNHG1-224ENST00000545688 AURKAO14965 403 aa7.89□□□□□ -1.15
SNHG1-224ENST00000545688 N4BP3O15049 544 aa7.89□□□□□ -1.15
SNHG1-224ENST00000545688 PI3P19957 117 aa7.89□□□□□ -1.15
SNHG1-224ENST00000545688 TMEM62Q0P6H9 643 aa7.89□□□□□ -1.15
SNHG1-224ENST00000545688 RCSD1Q6JBY9 416 aa7.89□□□□□ -1.15
SNHG1-224ENST00000545688 VHLLQ6RSH7 139 aa7.89□□□□□ -1.15
SNHG1-224ENST00000545688 SIGLEC10Q96LC7 697 aa7.89□□□□□ -1.15
SNHG1-224ENST00000545688 IRAK3Q9Y616 596 aa7.89□□□□□ -1.15
SNHG1-224ENST00000545688 TBC1D8O95759 1140 aa7.88□□□□□ -1.15
SNHG1-224ENST00000545688 ATF4P18848 351 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-224ENST00000545688 ERCC5P28715 1186 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-224ENST00000545688 CBX2Q14781 532 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-224ENST00000545688 PLEKHN1Q494U1 663 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-224ENST00000545688 ZNF385BQ569K4 471 aa7.88□□□□□ -1.15
SNHG1-224ENST00000545688 ARHGEF39Q8N4T4 335 aa7.88□□□□□ -1.15
SNHG1-224ENST00000545688 ZNF513Q8N8E2 541 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-224ENST00000545688 PANK1Q8TE04 598 aa7.88□□□□□ -1.15
SNHG1-224ENST00000545688 MZB1Q8WU39 189 aa7.88□□□□□ -1.15
SNHG1-224ENST00000545688 APEX2Q9UBZ4 518 aa7.88□□□□□ -1.15
SNHG1-224ENST00000545688 SUGT1Q9Y2Z0 365 aa7.88□□□□□ -1.15
SNHG1-224ENST00000545688 RFXAPO00287 272 aa7.87□□□□□ -1.15
SNHG1-224ENST00000545688 DBHP09172 617 aa7.87□□□□□ -1.15
SNHG1-224ENST00000545688 TACR1P25103 407 aa7.87□□□□□ -1.15
SNHG1-224ENST00000545688 L1CAMP32004 1257 aa7.87□□□□□ -1.15
SNHG1-224ENST00000545688 EEF1DP3Q658K8 133 aa7.87□□□□□ -1.15
SNHG1-224ENST00000545688 RCC1LQ96I51 464 aaKnown RBP7.87□□□□□ -1.15
SNHG1-224ENST00000545688 PDLIM7Q9NR12 457 aa7.87□□□□□ -1.15
SNHG1-224ENST00000545688 CCDC9Q9Y3X0 531 aaKnown RBP7.87□□□□□ -1.15
SNHG1-224ENST00000545688 ANKRD34BA5PLL1 514 aa7.86□□□□□ -1.15
SNHG1-224ENST00000545688 IRS4O14654 1257 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-224ENST00000545688 CORO7P57737 925 aa7.86□□□□□ -1.15
SNHG1-224ENST00000545688 AMPD2Q01433 879 aa7.86□□□□□ -1.15
SNHG1-224ENST00000545688 GRB10Q13322 594 aa7.86□□□□□ -1.15
SNHG1-224ENST00000545688 NR1I3Q14994 352 aa7.86□□□□□ -1.15
SNHG1-224ENST00000545688 BICRALQ6AI39 1079 aa7.86□□□□□ -1.15
SNHG1-224ENST00000545688 LDHDQ86WU2 507 aa7.86□□□□□ -1.15
SNHG1-224ENST00000545688 CAPN10Q9HC96 672 aa7.86□□□□□ -1.15
SNHG1-224ENST00000545688 EPB41L4AQ9HCS5 686 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-224ENST00000545688 BACE2Q9Y5Z0 518 aa7.86□□□□□ -1.15
SNHG1-224ENST00000545688 MRVI1Q9Y6F6 885 aa7.86□□□□□ -1.15
SNHG1-224ENST00000545688 A0A1W2PQJ5 194 aa7.85□□□□□ -1.15
SNHG1-224ENST00000545688 C2orf71A6NGG8 1288 aa7.85□□□□□ -1.15
SNHG1-224ENST00000545688 SRGAP3O43295 1099 aa7.85□□□□□ -1.15
SNHG1-224ENST00000545688 MAPKAPK2P49137 400 aa7.85□□□□□ -1.15
SNHG1-224ENST00000545688 SEPHS1P49903 392 aa7.85□□□□□ -1.15
SNHG1-224ENST00000545688 NCKAP1LP55160 1127 aa7.85□□□□□ -1.15
SNHG1-224ENST00000545688 IGDCC3Q8IVU1 814 aa7.85□□□□□ -1.15
SNHG1-224ENST00000545688 TMEFF1Q8IYR6 380 aa7.85□□□□□ -1.15
SNHG1-224ENST00000545688 ZNF428Q96B54 188 aa7.85□□□□□ -1.15
SNHG1-224ENST00000545688 PCDHA5Q9Y5H7 936 aa7.85□□□□□ -1.15
SNHG1-224ENST00000545688 HCFC2Q9Y5Z7 792 aa7.85□□□□□ -1.15
SNHG1-224ENST00000545688 SMAD7O15105 426 aaKnown RBP7.84□□□□□ -1.15
SNHG1-224ENST00000545688 CYBBP04839 570 aa7.84□□□□□ -1.15
SNHG1-224ENST00000545688 TCF3P15923 654 aa7.84□□□□□ -1.15
SNHG1-224ENST00000545688 ZNF200P98182 395 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-224ENST00000545688 TCERG1LQ5VWI1 586 aa7.84□□□□□ -1.15
SNHG1-224ENST00000545688 ZC3H14Q6PJT7 736 aaKnown RBP7.84□□□□□ -1.15
SNHG1-224ENST00000545688 PAQR3Q6TCH7 311 aa7.84□□□□□ -1.15
SNHG1-224ENST00000545688 NLGN2Q8NFZ4 835 aa7.84□□□□□ -1.15
SNHG1-224ENST00000545688 AKT3Q9Y243 479 aa7.84□□□□□ -1.15
SNHG1-224ENST00000545688 INHBBP09529 407 aa7.83□□□□□ -1.16
SNHG1-224ENST00000545688 TTLL10Q6ZVT0 673 aa7.83□□□□□ -1.16
SNHG1-224ENST00000545688 CPNE8Q86YQ8 564 aa7.83□□□□□ -1.16
SNHG1-224ENST00000545688 DACT3Q96B18 629 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-224ENST00000545688 KCNH1O95259 989 aa7.82□□□□□ -1.16
SNHG1-224ENST00000545688 NCAPHQ15003 741 aa7.82□□□□□ -1.16
SNHG1-224ENST00000545688 TMEM151BQ8IW70 566 aa7.82□□□□□ -1.16
SNHG1-224ENST00000545688 APBA2Q99767 749 aa7.82□□□□□ -1.16
SNHG1-224ENST00000545688 LGR4Q9BXB1 951 aa7.82□□□□□ -1.16
SNHG1-224ENST00000545688 FBLN5Q9UBX5 448 aa7.82□□□□□ -1.16
SNHG1-224ENST00000545688 PLA2G2DQ9UNK4 145 aa7.82□□□□□ -1.16
SNHG1-224ENST00000545688 EMC9Q9Y3B6 208 aa7.82□□□□□ -1.16
SNHG1-224ENST00000545688 RWDD3Q9Y3V2 267 aa7.82□□□□□ -1.16
SNHG1-224ENST00000545688 IRS2Q9Y4H2 1338 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms