RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 NEDD4P46934 1319 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 MOXD2PA6NHM9 499 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 KIAA0355O15063 1070 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 PCP11498 1178 aaKnown RBP13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 EPHB4P54760 987 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 FAAP100Q0VG06 881 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 SYDE2Q5VT97 1194 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 TAPT1Q6NXT6 567 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 MFSD6Q6ZSS7 791 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 CLEC4DQ8WXI8 215 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 ANKS1AQ92625 1134 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 TOX2Q96NM4 488 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 LBHD1Q9BQE6 289 aaPredicted RBP13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 GPCPD1Q9NPB8 672 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 PDGFCQ9NRA1 345 aa13.93□□□□□ -0.18
CLSTN3-211ENST00000541667 FRMPD2Q68DX3 1309 aaPredicted RBP13.92□□□□□ -0.18
CLSTN3-211ENST00000541667 LCTP09848 1927 aa13.92□□□□□ -0.18
CLSTN3-211ENST00000541667 ZNF543Q08ER8 600 aa13.92□□□□□ -0.18
CLSTN3-211ENST00000541667 IKQ13123 557 aaPredicted RBP13.92□□□□□ -0.18
CLSTN3-211ENST00000541667 DEFB123Q8N688 67 aa13.92□□□□□ -0.18
CLSTN3-211ENST00000541667 TOMM22Q9NS69 142 aa13.92□□□□□ -0.18
CLSTN3-211ENST00000541667 CCPG1Q9ULG6 757 aa13.92□□□□□ -0.18
CLSTN3-211ENST00000541667 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
CLSTN3-211ENST00000541667 ELP1O95163 1332 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 ASB14A6NK59 587 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 NFIBO00712 420 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 ZNF213O14771 459 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 ASGR1P07306 291 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 CLTBP09497 229 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 SMPD1P17405 629 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 BAATQ14032 418 aaPredicted RBP13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 CCDC96Q2M329 555 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 DGKHQ86XP1 1220 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 ZKSCAN3Q9BRR0 538 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 PRDM5Q9NQX1 630 aaPredicted RBP13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 STARD7Q9NQZ5 370 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 ZSWIM5Q9P217 1185 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 PRKAG2Q9UGJ0 569 aa13.91□□□□□ -0.18
CLSTN3-211ENST00000541667 GRIN2DO15399 1336 aa13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 PQBP1O60828 265 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 C6orf222P0C671 652 aaPredicted RBP13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 GSPT1P15170 499 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 MFAP1P55081 439 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 BEX3Q00994 111 aa13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 TNFAIP2Q03169 654 aa13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 GNASQ5JWF2 1037 aa13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 FAM109BQ6ICB4 259 aaPredicted RBP13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 SLC43A3Q8NBI5 491 aa13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 NUP133Q8WUM0 1156 aa13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 DSCC1Q9BVC3 393 aa13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 CPVLQ9H3G5 476 aa13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 RNF41Q9H4P4 317 aaPredicted RBP13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 TBX21Q9UL17 535 aa13.9□□□□□ -0.18
CLSTN3-211ENST00000541667 B4E1Z4 1266 aa13.89□□□□□ -0.19
CLSTN3-211ENST00000541667 GOLGA8HP0CJ92 632 aa13.89□□□□□ -0.19
CLSTN3-211ENST00000541667 IQSEC1Q6DN90 963 aa13.89□□□□□ -0.19
CLSTN3-211ENST00000541667 NSMFQ6X4W1 530 aa13.89□□□□□ -0.19
CLSTN3-211ENST00000541667 C16orf59Q7L2K0 433 aa13.89□□□□□ -0.19
CLSTN3-211ENST00000541667 PCSK9Q8NBP7 692 aaKnown RBP13.89□□□□□ -0.19
CLSTN3-211ENST00000541667 ESR2Q92731 530 aa13.89□□□□□ -0.19
CLSTN3-211ENST00000541667 UBA5Q9GZZ9 404 aa13.89□□□□□ -0.19
CLSTN3-211ENST00000541667 TMEM39AQ9NV64 488 aa13.89□□□□□ -0.19
CLSTN3-211ENST00000541667 RBM47A0AV96 593 aaKnown RBP13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 ARVCFO00192 962 aa13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 HIP1O00291 1037 aa13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 KDM4AO75164 1064 aa13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 CD4P01730 458 aa13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 EEPD1Q7L9B9 569 aa13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 FBXO16Q8IX29 292 aaPredicted RBP13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 FAM126BQ8IXS8 530 aa13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 ENAHQ8N8S7 591 aaPredicted RBP13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 TBC1D5Q92609 795 aa13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 GLT1D1Q96MS3 346 aa13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 GUCD1Q96NT3 240 aa13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 DIAPH3Q9NSV4 1193 aa13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 Q9Y3F1 56 aa13.88□□□□□ -0.19
CLSTN3-211ENST00000541667 DYNC1LI2O43237 492 aaPredicted RBP13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 TIMP1P01033 207 aa13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 EDNRBP24530 442 aa13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 NT5C2P49902 561 aa13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 RPS6P62753 249 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 TTC22Q5TAA0 569 aa13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 SLC30A10Q6XR72 485 aa13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 RGS22Q8NE09 1264 aa13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 ZSCAN10Q96SZ4 725 aaPredicted RBP13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 VTA1Q9NP79 307 aa13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 STXBP5LQ9Y2K9 1186 aa13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 A0A0C4DFX4 3053 aa13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 WDR19Q8NEZ3 1342 aa13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 LRRC37A2A6NM11 1700 aa13.87□□□□□ -0.19
CLSTN3-211ENST00000541667 LOC102724159A0A0B4J2E5 919 aa13.86□□□□□ -0.19
CLSTN3-211ENST00000541667 DCDC2CA8MYV0 355 aa13.86□□□□□ -0.19
CLSTN3-211ENST00000541667 RAG1P15918 1043 aa13.86□□□□□ -0.19
CLSTN3-211ENST00000541667 PWP2Q15269 919 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-211ENST00000541667 SEC23AQ15436 765 aa13.86□□□□□ -0.19
CLSTN3-211ENST00000541667 FSCN1Q16658 493 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-211ENST00000541667 GPATCH4Q5T3I0 446 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-211ENST00000541667 CXCL17Q6UXB2 119 aa13.86□□□□□ -0.19
CLSTN3-211ENST00000541667 TLK2Q86UE8 772 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms