RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CEP131Q9UPN4 1083 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 CCDC194A0A1B0GVG4 234 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 A0A1W2PQ27 194 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 A0A1W2PQ64 194 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 A0A1W2PQD8 194 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 FAM205CA6NFA0 338 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 ADAMTS3O15072 1205 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 PPP1R12BO60237 982 aaPredicted RBP16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 TBC1D8O95759 1140 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 BMP15O95972 392 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 ME1P48163 572 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 ADCY7P51828 1080 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 ADALQ6DHV7 355 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 CTU1Q7Z7A3 348 aaKnown RBP16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 ZNF280CQ8ND82 737 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 AMNQ9BXJ7 453 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 GLT8D2Q9H1C3 349 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 TMEM63CQ9P1W3 806 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 PTPRFP10586 1907 aa16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 TRIM75PA6NK02 468 aa16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 BACE1P56817 501 aa16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 MAP3K9P80192 1104 aa16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 TRAF1Q13077 416 aa16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 NOM1Q5C9Z4 860 aaKnown RBP16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 KRT25Q7Z3Z0 450 aa16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 ZNF296Q8WUU4 475 aaPredicted RBP16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 GZF1Q9H116 711 aaPredicted RBP16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 RANBP17Q9H2T7 1088 aaKnown RBP16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 RIC8AQ9NPQ8 531 aa16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 PCDHB6Q9Y5E3 794 aa16.28■□□□□ 0.2
CYB561A3-216ENST00000540755 C19orf81C9J6K1 198 aa16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 IREB2P48200 963 aaKnown RBP16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 MLLT1Q03111 559 aaPredicted RBP16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 SPP2Q13103 211 aa16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 MTMR2Q13614 643 aa16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 TTC38Q5R3I4 469 aa16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 FBXO11Q86XK2 927 aa16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 REXO1Q8N1G1 1221 aaKnown RBP16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 RASGRP4Q8TDF6 673 aa16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 C12orf42Q96LP6 360 aa16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 CFHR5Q9BXR6 569 aa16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 R3HDMLQ9H3Y0 253 aa16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 PCDHA1Q9Y5I3 950 aa16.27■□□□□ 0.19
CYB561A3-216ENST00000540755 MRPL12P52815 198 aaKnown RBP16.26■□□□□ 0.19
CYB561A3-216ENST00000540755 SREBF2Q12772 1141 aa16.26■□□□□ 0.19
CYB561A3-216ENST00000540755 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.26■□□□□ 0.19
CYB561A3-216ENST00000540755 TEX2Q8IWB9 1127 aa16.26■□□□□ 0.19
CYB561A3-216ENST00000540755 CUL5Q93034 780 aa16.26■□□□□ 0.19
CYB561A3-216ENST00000540755 WNK4Q96J92 1243 aa16.26■□□□□ 0.19
CYB561A3-216ENST00000540755 EMILIN3Q9NT22 766 aa16.26■□□□□ 0.19
CYB561A3-216ENST00000540755 SNCAIPQ9Y6H5 919 aa16.26■□□□□ 0.19
CYB561A3-216ENST00000540755 LIG1P18858 919 aa16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 VCAM1P19320 739 aa16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 ATP2B1P20020 1258 aa16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 DEKP35659 375 aaKnown RBP16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 GJA5P36382 358 aa16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 CLK2P49760 499 aaKnown RBP16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 VGLL4Q14135 290 aa16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 NONOQ15233 471 aaKnown RBP eCLIP16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 TPRNQ4KMQ1 711 aa16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 AXDND1Q5T1B0 1012 aaPredicted RBP16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 CCDC183Q5T5S1 534 aa16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 CCAR1Q8IX12 1150 aaKnown RBP16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 MRPS27Q92552 414 aaKnown RBP16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 CSADQ9Y600 493 aa16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 ZHX2Q9Y6X8 837 aa16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 RLFQ13129 1914 aa16.25■□□□□ 0.19
CYB561A3-216ENST00000540755 GPR25O00155 361 aa16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 CUTAO60888 179 aa16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 ZBTB48P10074 688 aaPredicted RBP16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 MARCKSP29966 332 aaPredicted RBP16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 ZSCAN23Q3MJ62 389 aa16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 KRI1Q8N9T8 703 aaKnown RBP16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 KIFC2Q96AC6 838 aa16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 SLF1Q9BQI6 1058 aa16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 DDX19AQ9NUU7 478 aaKnown RBP16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 AFG3L2Q9Y4W6 797 aa16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 MYH7BA7E2Y1 1941 aa16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 LOC285556D6RIA3 1793 aa16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 SMCHD1A6NHR9 2005 aa16.24■□□□□ 0.19
CYB561A3-216ENST00000540755 IGF2BP3O00425 579 aaKnown RBP eCLIP16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 WNT7AO00755 349 aa16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 PTPREP23469 700 aa16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 CMA1P23946 247 aa16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 SOX10P56693 466 aa16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 ZNF445P59923 1031 aa16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 SNAP25P60880 206 aa16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 INF2Q27J81 1249 aa16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 SH3D19Q5HYK7 790 aa16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 JAKMIP3Q5VZ66 844 aa16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 CCDC73Q6ZRK6 1079 aa16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 ANKRD13AQ8IZ07 590 aa16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 PRPF38AQ8NAV1 312 aaKnown RBP16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 BIN2Q9UBW5 565 aaPredicted RBP16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 FBXO2Q9UK22 296 aaPredicted RBP16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 SRPRBQ9Y5M8 271 aaKnown RBP16.23■□□□□ 0.19
CYB561A3-216ENST00000540755 FAM237AA0A1B0GTK4 181 aa16.22■□□□□ 0.19
CYB561A3-216ENST00000540755 UNCXA6NJT0 531 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms