RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 JAK2O60674 1132 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 MCF2P10911 925 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 CAV1Q03135 178 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 ZNF658Q5TYW1 1059 aaPredicted RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 KRT80Q6KB66 452 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 PARP9Q8IXQ6 854 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 FAM227BQ96M60 508 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 SETDB2Q96T68 719 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 AFG3L2Q9Y4W6 797 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 DENND4BO75064 1496 aaPredicted RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 PLB1Q6P1J6 1458 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 ANO9A1A5B4 782 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 BUB1O43683 1085 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 RBL2Q08999 1139 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 BFSP1Q12934 665 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 SLC39A14Q15043 492 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 NCAPH2Q6IBW4 605 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 KRT28Q7Z3Y7 464 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 RAB44Q7Z6P3 723 aaPredicted RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 GRAMD1AQ96CP6 724 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 DCAF5Q96JK2 942 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 ARHGEF10LQ9HCE6 1279 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 ARPP21Q9UBL0 812 aaPredicted RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 GRID2IPA4D2P6 1211 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 CHL1O00533 1208 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 CASP14P31944 242 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 NT5C2P49902 561 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 MKRN3Q13064 507 aaKnown RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 PLS1Q14651 629 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 HIBCHQ6NVY1 386 aaPredicted RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 STAMBPL1Q96FJ0 436 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 BLZF1Q9H2G9 400 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 PANK4Q9NVE7 773 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 TARSL2A2RTX5 802 aaKnown RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 PODXLO00592 558 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 MAN1A2O60476 641 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 SEMA3FQ13275 785 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 PARP10Q53GL7 1025 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 JADE1Q6IE81 842 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 OTUD6AQ7L8S5 288 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 CATSPER1Q8NEC5 780 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 CACTINQ8WUQ7 758 aaKnown RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 CCDC138Q96M89 665 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 RNMTO43148 476 aaKnown RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 SERPING1P05155 500 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 KCNA4P22459 653 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 PRPSAP1Q14558 356 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 RNF34Q969K3 372 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 XAGE2Q96GT9 111 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 ADAM21Q9UKJ8 722 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 PNMA2Q9UL42 364 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 YTHDC2Q9H6S0 1430 aaKnown RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 ARHGEF9O43307 516 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 GSPT1P15170 499 aaKnown RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 MSH2P43246 934 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 KCTD16Q68DU8 428 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 BLIDQ8IZY5 108 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.53□□□□□ -1.2
SORT1-209ENST00000538502 EYA3Q99504 573 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 ZMYND12Q9H0C1 365 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 ABCB6Q9NP58 842 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 NLRC4Q9NPP4 1024 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 A0A1W2PP64 1363 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 ZBED6P86452 979 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 MAN2A1Q16706 1144 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 FAM133BQ5BKY9 247 aaKnown RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 AKNAD1Q5T1N1 836 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 CC2D1AQ6P1N0 951 aaPredicted RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 FAM173BQ6P4H8 233 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 REXO1Q8N1G1 1221 aaKnown RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 MIGA1Q8NAN2 632 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 CNOT6LQ96LI5 555 aaKnown RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 CARD10Q9BWT7 1032 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 TADA3O75528 432 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 OR52Z1P0C646 297 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 ESRRAP11474 423 aaPredicted RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 ACTN1P12814 892 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 POLR2FP61218 127 aaKnown RBP7.53□□□□□ -1.2
SORT1-209ENST00000538502 PSMD2Q13200 908 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 DIXDC1Q155Q3 683 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 ARHGEF25Q86VW2 580 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 LPIN2Q92539 896 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 ZBTB9Q96C00 473 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 CLASP1Q7Z460 1538 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 IQANK1A0A1B0GTG1 560 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 MX2P20592 715 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 RFC4P35249 363 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 MFAP3P55082 362 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 MAP7D3Q8IWC1 876 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 TRIML2Q8N7C3 387 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 SCYL1Q96KG9 808 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 TUBGCP2Q9BSJ2 902 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 VIPAS39Q9H9C1 493 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 PSD3Q9NYI0 1048 aa7.53□□□□□ -1.2
SORT1-209ENST00000538502 BACH1O14867 736 aa7.52□□□□□ -1.2
SORT1-209ENST00000538502 PPP1R12AO14974 1030 aaPredicted RBP7.52□□□□□ -1.2
SORT1-209ENST00000538502 SRGAP2BP0DMP2 458 aa7.52□□□□□ -1.2
SORT1-209ENST00000538502 PCYT1AP49585 367 aa7.52□□□□□ -1.2
SORT1-209ENST00000538502 AP2B1P63010 937 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms