RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 SOGA3Q5TF21 947 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 NCAPH2Q6IBW4 605 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 ELOA2Q8IYF1 753 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-203ENST00000537796 RGS22Q8NE09 1264 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 RRP36Q96EU6 259 aaKnown RBP8.38□□□□□ -1.07
NECAP1-203ENST00000537796 PKNOX2Q96KN3 472 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 MMTAG2Q9BU76 263 aaKnown RBP8.38□□□□□ -1.07
NECAP1-203ENST00000537796 RWDD2AQ9UIY3 292 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 FHOD1Q9Y613 1164 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 BTAF1O14981 1849 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 GPR75-ASB3A0A0A6YYF3 556 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 PPP1R11O60927 126 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-203ENST00000537796 LDHCP07864 332 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 PLEKP08567 350 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-203ENST00000537796 OR52Z1P0C646 297 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 ST5P78524 1137 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 MAP3K9P80192 1104 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 APBA1Q02410 837 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 NONOQ15233 471 aaKnown RBP eCLIP8.38□□□□□ -1.07
NECAP1-203ENST00000537796 SYCP1Q15431 976 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 ECM1Q16610 540 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 C16orf86Q6ZW13 317 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 KIAA0825Q8IV33 1275 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 ADSSL1Q8N142 457 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 FNBP4Q8N3X1 1017 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-203ENST00000537796 CSGALNACT2Q8N6G5 542 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 CAPZA3Q96KX2 299 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 GDAP1L1Q96MZ0 367 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 PARD6BQ9BYG5 372 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 USP40Q9NVE5 1235 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 REXO2Q9Y3B8 237 aaKnown RBP8.38□□□□□ -1.07
NECAP1-203ENST00000537796 MRFAP1Q9Y605 127 aa8.38□□□□□ -1.07
NECAP1-203ENST00000537796 PCNTO95613 3336 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 USP17L15C9J2P7 530 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 USP17L10C9JJH3 530 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 USP17L13C9JLJ4 530 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 USP17L11C9JVI0 530 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 USP17L18D6R9N7 530 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 USP17L22D6RA61 530 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 USP17L17D6RBQ6 530 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 USP17L19D6RCP7 530 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 USP17L20D6RJB6 530 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 EDIL3O43854 480 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 PNMA6AP0CW24 399 aaPredicted RBP8.37□□□□□ -1.07
NECAP1-203ENST00000537796 PDHBP11177 359 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 TRAPPC10P48553 1259 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 RBM5P52756 815 aaKnown RBP eCLIP8.37□□□□□ -1.07
NECAP1-203ENST00000537796 PPP4CP60510 307 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 DMTNQ08495 405 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 USP17L24Q0WX57 530 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 ENOX2Q16206 610 aaKnown RBP8.37□□□□□ -1.07
NECAP1-203ENST00000537796 USP17L6PQ6QN14 398 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 KRT26Q7Z3Y9 468 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 SMCR8Q8TEV9 937 aaPredicted RBP8.37□□□□□ -1.07
NECAP1-203ENST00000537796 DRC1Q96MC2 740 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 DUSP9Q99956 384 aaKnown RBP8.37□□□□□ -1.07
NECAP1-203ENST00000537796 SCAF8Q9UPN6 1271 aaKnown RBP8.37□□□□□ -1.07
NECAP1-203ENST00000537796 NPHP3-ACAD11A0A0J9YXS1 232 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 ZMYND10O75800 440 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 KCNJ6P48051 423 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 KRT222Q8N1A0 295 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 REXO1Q8N1G1 1221 aaKnown RBP8.37□□□□□ -1.07
NECAP1-203ENST00000537796 NEDD1Q8NHV4 660 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 RBM17Q96I25 401 aaKnown RBP8.37□□□□□ -1.07
NECAP1-203ENST00000537796 PSMB7Q99436 277 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 FEZ1Q99689 392 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 BCAS3Q9H6U6 928 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 TCP11L1Q9NUJ3 509 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 MORC2Q9Y6X9 1032 aaPredicted RBP8.37□□□□□ -1.07
NECAP1-203ENST00000537796 LTBP4Q8N2S1 1624 aa8.37□□□□□ -1.07
NECAP1-203ENST00000537796 RREB1Q92766 1687 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 RCCD1A6NED2 376 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 G3V3G9 751 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 TULP1O00294 542 aaPredicted RBP8.36□□□□□ -1.07
NECAP1-203ENST00000537796 EPHB6O15197 1021 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 CCP110O43303 1012 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 MTIF2P46199 727 aaKnown RBP8.36□□□□□ -1.07
NECAP1-203ENST00000537796 PLA2G4AP47712 749 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 DCAF8Q5TAQ9 597 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 NEK8Q86SG6 692 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 PROM2Q8N271 834 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 CCDC148Q8NFR7 591 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 ZNF622Q969S3 477 aaKnown RBP eCLIP8.36□□□□□ -1.07
NECAP1-203ENST00000537796 PANX2Q96RD6 677 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 FGFBP2Q9BYJ0 223 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 TRIM9Q9C026 710 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 ZMYND12Q9H0C1 365 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 LIMA1Q9UHB6 759 aaKnown RBP8.36□□□□□ -1.07
NECAP1-203ENST00000537796 KIAA1551Q9HCM1 1747 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 MYMKA6NI61 221 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 RASSF10A6NK89 507 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 KIF5CO60282 957 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 STAT3P40763 770 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 GNAQP50148 359 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 FKBP15Q5T1M5 1219 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 ARL6IP4Q66PJ3 421 aaKnown RBP8.36□□□□□ -1.07
NECAP1-203ENST00000537796 TMCO3Q6UWJ1 677 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 ZSCAN29Q8IWY8 852 aaPredicted RBP8.36□□□□□ -1.07
NECAP1-203ENST00000537796 MB21D1Q8N884 522 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 KIAA0895Q8NCT3 520 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms